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Clone Read LE_HBa0100H03_SP6_32212

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0100H03_SP6_32212
Primer
SP6
ID from Seq. Facility
LE_HBa_100_H03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
687 trimmed for vector and quality, 914 raw
Genbank Accession
Sequence
>LE_HBa0100H03_SP6_32212 (raw untrimmed)
CGAGGATATCCTTTCGTTTTCAAGCAATTCTTAATCTTTTTAAATTTTTTTTATGTATATTCATTTTTTTTCGTACCTTTCGTCTATAAGCTTTGTAAGA
AAGAAAAACGAAAATCACTTTAAGTTGATCACTAATTAAATTTTTCATTCCCTTTAAAGCAATTCTTGATCTTCTCAAAAAAAATTGTAATACATCAATT
TTTCGACCAAGTTGATCACCAACTAAACTTACATTCTCATTTCAAAGCTATTCTTGATCTTTTCAGAATTTTTATGTATATTTATCTTTCATATTCATTT
TTTTTATTGTATTTAACGTCTATAGGCTTTGTAAGAAAGAAAAAAAAAACAAAAACCAATTCAAGTTGATCACTAATTAAATTTTTCATTCCCTTTAGAG
CAATTCTTGATCTTCTCAAAAAAAATTGTAATACATCAATTTTTCGCCAAGTTGATCACCAACTAAACTTACATTCTCATTTCAAAGCTATTCTAGATCT
TTTCAGAATTTTTACGGATATTTATCTTTCACCTTGTATCCTAACACTTCTATAATCTTATATAAGAAAAAAACAACGATAATCAATTCAAGTTGGTCAC
CAACTAAACTTTTCATTTCTATTTCAAAGCAATTCTTGATCTTTTTAGAATTTTTACATACATACATCTTTCACCATATACCCCAACACTCTTATAATTT
TATATAAGAAAAAAAACACGATAACCAAGTCAAGTAGGTAACAAGCTAAACTTTTCATTCTCATTCCAAGCAATTTTTTTTTAATCTTTTAAAATTTTTA
CGTACCTTCCACTTTCAACTAGTAGCCGACACTCCTATAAATCTTATGTAAGGAAAAAAAAAACGACATTCATTTCAAGTGGGCAGAACTAAACTTTTCA
TCACGTTTAAAATT
>LE_HBa0100H03_SP6_32212 (trimmed for quality and cloning vector)
TCTTAATCTTTTTAAATTTTTTTTATGTATATTCATTTTTTTTCGTACCTTTCGTCTATAAGCTTTGTAAGAAAGAAAAACGAAAATCACTTTAAGTTGA
TCACTAATTAAATTTTTCATTCCCTTTAAAGCAATTCTTGATCTTCTCAAAAAAAATTGTAATACATCAATTTTTCGACCAAGTTGATCACCAACTAAAC
TTACATTCTCATTTCAAAGCTATTCTTGATCTTTTCAGAATTTTTATGTATATTTATCTTTCATATTCATTTTTTTTATTGTATTTAACGTCTATAGGCT
TTGTAAGAAAGAAAAAAAAAACAAAAACCAATTCAAGTTGATCACTAATTAAATTTTTCATTCCCTTTAGAGCAATTCTTGATCTTCTCAAAAAAAATTG
TAATACATCAATTTTTCGCCAAGTTGATCACCAACTAAACTTACATTCTCATTTCAAAGCTATTCTAGATCTTTTCAGAATTTTTACGGATATTTATCTT
TCACCTTGTATCCTAACACTTCTATAATCTTATATAAGAAAAAAACAACGATAATCAATTCAAGTTGGTCACCAACTAAACTTTTCATTTCTATTTCAAA
GCAATTCTTGATCTTTTTAGAATTTTTACATACATACATCTTTCACCATATACCCCAACACTCTTATAATTTTATATAAGAAAAAAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.876953
Expected error %
1.08496
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0100H03
Clone
Clone name
hba-100h3
LE_HBa0100H03
C12HBa0100H03
P100H03
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found