Clone Read LE_HBa0100I21_T7_32297

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0100I21_T7_32297
Primer
T7
ID from Seq. Facility
LE_HBa_100_I21-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
780 trimmed for vector and quality, 868 raw
Genbank Accession
DU087884
Sequence
>LE_HBa0100I21_T7_32297 (raw untrimmed)
GATCTAGCCTGGTCCCGGGGGAACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTGACTGATCATCTTGCGGAAAATCTTCGTCGATGAAGAGTACGAA
CCACTTAAGACTTATTTTAACGATGAAGAAGTGTCGTTTGTGGGTGAGTATATTTATGAAGCATATCCAGGTTGGAGATTATTCTTTGACGGAGCGGAAA
ATCATCAAGGTAAAGGTATTGGAGCATTCTTAGTGTCAGAATCTGGTAAGCACTATCCCATGGTAGCTAAGCTCCGATTTACTTGCACAAACAACATGGC
CGAATACGAAACTTGTATTCTTGGTTTGAAAATGGCCATCGACATGAATGTTTATGAGTTATTGGTTATTGGAGACTCAGATCTTTTGATTCATCAAGTT
CAAGGAGAATGGTCTGTGAAGAACAGAAGATTATACCTTACGTACGCCATGTGCAGAAGTTATGTGAAAGATTTCGTATGATCGAGTTCAGACATACTCC
CAGAATACAGAATGAATTACCTGATGCTCTGGCCACCATCTTTTCAATGATTAAACATACGGATACAGATTACATCGATTTTCTGGATATAGAGTTGAAA
GAACATCCAGTCCATTGTTCCCATGTTGAAGCAGAACCGGACGGTTTGCCTTGGTATTTTGATATAAAGAAGTATTTGGAGTCTGGAACTTATCCTAATG
ATTCTATGTCCAATCAAAAGAAGTCGATACGCCGTATGACTCTCAATTTCTTCCTAAGTGGAAAAGCCCTGTATAGGAGGACTCCTGACTTAGGTCTTCT
TTTAAGTCCCCATGCCCCCAAAGCTCCAAGGCTCATTGAACAGATACTGCTGGAATTTGTGGTACTTG
>LE_HBa0100I21_T7_32297 (trimmed for quality and cloning vector)
AGCTTTGACTGATCATCTTGCGGAAAATCTTCGTCGATGAAGAGTACGAACCACTTAAGACTTATTTTAACGATGAAGAAGTGTCGTTTGTGGGTGAGTA
TATTTATGAAGCATATCCAGGTTGGAGATTATTCTTTGACGGAGCGGAAAATCATCAAGGTAAAGGTATTGGAGCATTCTTAGTGTCAGAATCTGGTAAG
CACTATCCCATGGTAGCTAAGCTCCGATTTACTTGCACAAACAACATGGCCGAATACGAAACTTGTATTCTTGGTTTGAAAATGGCCATCGACATGAATG
TTTATGAGTTATTGGTTATTGGAGACTCAGATCTTTTGATTCATCAAGTTCAAGGAGAATGGTCTGTGAAGAACAGAAGATTATACCTTACGTACGCCAT
GTGCAGAAGTTATGTGAAAGATTTCGTATGATCGAGTTCAGACATACTCCCAGAATACAGAATGAATTACCTGATGCTCTGGCCACCATCTTTTCAATGA
TTAAACATACGGATACAGATTACATCGATTTTCTGGATATAGAGTTGAAAGAACATCCAGTCCATTGTTCCCATGTTGAAGCAGAACCGGACGGTTTGCC
TTGGTATTTTGATATAAAGAAGTATTTGGAGTCTGGAACTTATCCTAATGATTCTATGTCCAATCAAAAGAAGTCGATACGCCGTATGACTCTCAATTTC
TTCCTAAGTGGAAAAGCCCTGTATAGGAGGACTCCTGACTTAGGTCTTCTTTTAAGTCCCCATGCCCCCAAAGCTCCAAG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.977737
Expected error %
0.659852
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAU89777.1| Score 182 E Value 9e-45 Identity 23.90% Align. Length 371bp (47.56%) Frame 3
gag-pol polyprotein-like [Solanum tuberosum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAU90285.1| Score 168 E Value 1e-40 Identity 34.10% Align. Length 742bp (95.13%) Frame 1
putative gag/pol polyprotein, 3'-partial [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0100I21
Clone
Clone name
hba-100i21
LE_HBa0100I21
P100I21
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found