Clone Read LE_HBa0110J17_T7_35409

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0110J17_T7_35409
Primer
T7
ID from Seq. Facility
LE_HBa_110_J17-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
689 trimmed for vector and quality, 820 raw
Sequence
>LE_HBa0110J17_T7_35409 (raw untrimmed)
GGCCCGGTCCCGGGGGGTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGCCTTAGAAAATCCTACATGGGGTTGTCTGACGTCCCTTGCTAGATGCGC
ACAAACCTATGCTACCTGTTGCTGGCCACCATCACCTTGTCGATGCACGAAGGCTTACAATAATGTTGCCCAATCGATGCATCCACGCCACGAATTATGT
GTGCAAGCCTTGGTTGATGTTGCCTGCCATTGATCGATTCCGCAGTGCTTATGCATGCAGGTCACGACTAATGTCACCGAGTTTATGCCCACATGCCATA
GGTGATGCATACAGACCTTGGCTATAGTTTCTTGTTGTTAATTGATGTCGCTTCGCTTGCGCATGTAGGACACAAAAAATGCACTAACACCATAGTTGAA
GTCACCTTGTCTATGTCCACATGACATGATCGATGCATGGAGGCCTTGGCTGATGTTGCATGTTGTTGGTTACTTGCATTATGCCCACATGCCACATCCA
TTCATGGATGCCCTGATTAATTCCTCATGACATAGGCCAATTTCTCTGATAGGATACACACATTCCACGTTTGTGCTTGCATGACTTGGCTTAAGTTTCA
TACGCCCCTTTTTTTGTTTCTTTTTTTTTTTTCTTTCTTTTCATCAGATTTCAAGCTTGACTCTCCTGATGTAACTTGTTGTCGGTTGACATTAGCATAA
CAATGTGTGCAGGATACACACCACTGTTGGCAGGACCATTTTATGTTTGCATATCGATATGCAATAATTTTTGCGCCATGTCATATTGGTAATGTTTTTA
CATCCTCCAAACTGAATAAT
>LE_HBa0110J17_T7_35409 (trimmed for quality and cloning vector)
AGCTTGCCTTAGAAAATCCTACATGGGGTTGTCTGACGTCCCTTGCTAGATGCGCACAAACCTATGCTACCTGTTGCTGGCCACCATCACCTTGTCGATG
CACGAAGGCTTACAATAATGTTGCCCAATCGATGCATCCACGCCACGAATTATGTGTGCAAGCCTTGGTTGATGTTGCCTGCCATTGATCGATTCCGCAG
TGCTTATGCATGCAGGTCACGACTAATGTCACCGAGTTTATGCCCACATGCCATAGGTGATGCATACAGACCTTGGCTATAGTTTCTTGTTGTTAATTGA
TGTCGCTTCGCTTGCGCATGTAGGACACAAAAAATGCACTAACACCATAGTTGAAGTCACCTTGTCTATGTCCACATGACATGATCGATGCATGGAGGCC
TTGGCTGATGTTGCATGTTGTTGGTTACTTGCATTATGCCCACATGCCACATCCATTCATGGATGCCCTGATTAATTCCTCATGACATAGGCCAATTTCT
CTGATAGGATACACACATTCCACGTTTGTGCTTGCATGACTTGGCTTAAGTTTCATACGCCCCTTTTTTTGTTTCTTTTTTTTTTTTCTTTCTTTTCATC
AGATTTCAAGCTTGACTCTCCTGATGTAACTTGTTGTCGGTTGACATTAGCATAACAATGTGTGCAGGATACACACCACTGTTGGCAGG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.957317
Expected error %
1.27049
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0110J17
Clone
Clone name
hba-110j17
LE_HBa0110J17
C12HBa0110J17
P110J17
Clone type
BAC
Contamination
none
Estimated length
105,073
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found