Clone Read LE_HBa0111P06_T7_36443

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0111P06_T7_36443
Primer
T7
ID from Seq. Facility
LE_HBa_111_P06-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 933 raw
Sequence
>LE_HBa0111P06_T7_36443 (raw untrimmed)
TCTTTTTCATTATCATCATATAAAAATGTTAAATAATAATTATGGATCCATTTTAGAAGATTACATTACTAAAATACTAGGGTAAGTTCATATCATAACC
ATGGCATAAATAATGATAGACAATACAAATCAATATGAATCGATAAATAATCATCAAGGACCCTACAATAGATTATACTATATAACCCTTATATTGTANT
TTGTGTAGAAATATGTATATTTGATTTATTGAAGTTCCTTTCTTTTTTTTTTTTTTGTTTTTTTTTTTTTATATTAGATGGTATAATCTTATAAAATATT
CAATGGATTATTCAAATAACATAATCATATTTTGGATAAATGAAATAATTAATTGATAAGAATGAAAAACCACATAACCGTATTTGTATGATATATAACT
TATAGAAATATTAGTTAGAGTAATATTCCCATTAGATATAATAAAATATAATAAATATTTTATTGTATTAGTTGTCAAATGTGTTTAAAATGAATATAAT
ATTAATACGTAATCTTATAATTTCTAATATAATAACATAACTTAATTTATTTATTATTTATTTATTATTTGCCGCACCCCCAATAATATAATTTATTATT
TTATTTTTNATTTAATTAATTATATTTAATATTATATATNATATATATTATTTTTTTTTTAATTTTTTTATTTTTTATTTAAATATTATTTTATATTATT
TTTTTTTTTATTATT
TTTTTTTTATTTTTTTATGAAAATAATTATTTTGTAATTTATTGGAATCTATTTTTGTTTGTATATATAAGTTTATTTATAGTTT
TTATTTTTTTTTCTATTGTTATACTGAACATGCTTCTCTAATAGTAGTACATATCTATTTTGTGATTATTTATCGTATAGTAAATTAAATCTTATTGATT
TTTTATTTTTTCTTCTATAACTGCTTATTATAT
>LE_HBa0111P06_T7_36443 (trimmed for quality and cloning vector)
TTTT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.688356
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0111P06
Clone
Clone name
hba-111p6
LE_HBa0111P06
P111P06
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found