Clone Read LE_HBa0203E06_SP6_368062

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0203E06_SP6_368062
Primer
SP6
ID from Seq. Facility
LE_HBa_203_E06-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 996 raw
Sequence
>LE_HBa0203E06_SP6_368062 (raw untrimmed)
GCCTATATTTATTGACCTCAAAACACATTACATTATCAACGGATAGTATACAAAAAGCCCCCTTTTAAGGACGGCATTATAGAGATTATATATAAAACCC
CCCTTAGAAATATCTAATTACACCATATTCATTGGATAAGTACATGATGATAAACAACTAAGACATCCACCTATATATGAAGAAAAGCAAAAACAATAAA
CTCGCCAACGGAGATCATCTATCTCAGATACTCATTTATGCCGTTGGAGGAATATTTAATCTGCAATACAT
AAAAAGCGCGTGACATAACTTAACATCGC
TAACTGACCACACTGCATATATTCGACACAAATTCCCAAATACATCCCTCAGCTATTCTCACTGTCGTCATCGATCATTCCATGTATAATCAACAATAAC
GCAAATGCACTTACCCCGTATATATACGAACATATCATAACTCTACTAAACGCTCGTCTATAATCATACAACTCTATCGCAGCATTCCGCACGATAATAC
CCCACCCGACAAGCTTTTCTAAATATACACTTAAATTACAATCTCCCCTTGATAAGCAAAAAACCCAATCGAAATTTAATATCGCCAACATTACACTCAT
TCCCCGGTCGCTCTTCCATCCCCACAATTAATCTTTTTCAACCACCTCCCTATCAACCAAACCTTTTATTCTAATCCTTAAACCACAACTCCTCTCACCC
TATACTCCTCACGAATAAATGCCCTAGTCCATCCCTTTCACTCCTTCTCCCTCCCTTACTTCAACAACTCCCAATTCCTTTCCCCCTCTTACACCTTACA
CCAAATTCCCCACCCCCTTCCCCTCCCGGTAAACCCCTCCCTACTCACCCCTCCCTATCTACCTCTCCCCTCACTTTTCCCACCCACCCAATTCCCCCTC
CCCCACATCCCTAATATTTATTTTTACCCCTCCTACCCTCTACCCCTCTTCCTCAATTTTCCCTCTCAACCCAACTTCTTCCAATTATTCTTCATA
>LE_HBa0203E06_SP6_368062 (trimmed for quality and cloning vector)
AA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
  • Not screened for contaminants
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.58518
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0203E06
Clone
Clone name
hba-203e6
LE_HBa0203E06
C01HBa0203E06
P203E06
Clone type
BAC
Contamination
none
Estimated length
108,390
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found