Clone Read LE_HBa0206A16_SP6_369426

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0206A16_SP6_369426
Primer
SP6
ID from Seq. Facility
LE_HBa_206_A16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
93 trimmed for vector and quality, 901 raw
Sequence
>LE_HBa0206A16_SP6_369426 (raw untrimmed)
CCTCTTTGAGAGCGTGTTAGGGCACCTATCTATCCTAACTAAATCTTTTTAAGCTTAACGAGCTAGAGATTGGGGTAAGAGTTTAAATTACCTCCAAGGG
AAGGTGTTAGGCATCCCTCCAGGTCCACAAACTGTGGTCCCTTCATTTATTAATTTATTTCAGCGTGATACGTGATCACCAATATATAAACGACTAAGTC
TCTTATAAGTTTGATAAGAGATTGAGAATGCCAAGCTAGGTGATAACGATTAAAAAAAAACATGTTAGATTGATTATGTAAGCATACGATACTATGTCGT
AGAAAAAATATGTCATGATTAAGCTATTATTATATTGGAAAGAATAGGATTGACAACTTAGCATGATACGAATATGAATTTGTTATAAGAAAAAGTGGTT
GTATATTTATAAGCATGATGTAATCAATACGGAATGTTACTCAACATCACAATGTCAGCTATTGGAATAAGATGCCGGACTTAAGAGATATCTTCATTTT
TAGAGCAAGAATTAAAAACTTTAGAATTCGTATAAGGACTTAAGACTTTCCTAAGAATAACAAAAGAACTCACCAAAATTCCGGGCAAGAGGAATTTATA
AAGGACACTACAGGTTAAAACAAATAGTACCAAGATCTTGAAAATCAATGACTCTTTCACTAGCGAATATTTATAAGAAACTTCTATGGTTAATTCTTTT
TATTGGAATCGAGTTAATAAATAGGGAAAAGTTTTAAAGTTTGATTTTACTATGGACTTTAATAATGGGTACAAGATTTTTTGAAAACTTGGCTGCAAAA
AACTAATTAATTAAATTTATTTTAATATAACGCAATTTTCATATAAGGTTCCAAGGCAATTATTTCTAAATTCTTTTTCAATCTTTTATTTAAAACTTTT
A
>LE_HBa0206A16_SP6_369426 (trimmed for quality and cloning vector)
TTAGGGCACCTATCTATCCTAACTAAATCTTTTTAAGCTTAACGAGCTAGAGATTGGGGTAAGAGTTTAAATTACCTCCAAGGGAAGGTGTTA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.918741
Expected error %
1.37039
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0206A16
Clone
Clone name
hba-206a16
LE_HBa0206A16
P206A16
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found