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Clone Read LE_HBa0208H09_SP6_371108

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0208H09_SP6_371108
Primer
SP6
ID from Seq. Facility
LE_HBa_208_H09-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
714 trimmed for vector and quality, 1015 raw
Sequence
>LE_HBa0208H09_SP6_371108 (raw untrimmed)
CCCCCCGTGCGAGAGTTGGGGTCGAATCCACTCCCTCATTTCTTATTCTTTTCATTTTTTCCTTGAGCTTGACCGAGAGGTTGTGGGTTCGAATCCCACT
CCTCTCATTTCTTATTTTCATATATACTTTATTTTTCAGCCAGGAGCATGGTCTAGTTCCCCCGTACCACATTGTTTTTTACTTCTTTATTTCCACCACA
TTTTTTGTGGTTAGGTCACATGTTCGACCCTCAGTGACCTCACTTATTTTTCTTCGCTTTTCATGACATTTTAAACAACATAAATTGGATGAAATTAATC
AACAAGGTGCTTGAAATTTGAGTTACATTTTCAACTTCTTTTCCATTCCAATATTCGATAGTACTTAGGAGAATTTCATAGTGCATTTAGAACGTTTTAG
TTGTGTTTTCATAGTTTCCTTTAAACAAGAGATTTTCACTCAAATCAGCCACATTTCATCTCATATGAAACTGACGATTTACATAAACATGTGTACATGA
AATACAAAGAACTAACATGCCATTTAAATTCCTACACCGTTACCAATAGCCATGACAATGCACCCAAACGCTTGTAGTCACATTTTTAGAGAACATAGAC
ATAAGTCACATAATTCCGAACATACATACAAAAATATGGGTATCACTTAAACACGTTTTATCCTATTTTTCTACCAACAAGCATAACAAACCTAAAATTC
AATGGGATCTAGTGACAGGGACATGAAACGGGGAAAGAACCCTAGTTTTCGGACGAACTATACTGAACCTTAAGGGGTCTATTGGGGAAGGGACCTATAG
AGAAGAGAACCCTACCCTTTATGAAATTCAACCTTTGAATTGCTACCCAAACATTCTCAACACTTCAGTCCCAAACAAAATTTCACCCCAAACTTTTACG
GAAAACCCTCCCTTTTCTTGCCGGACTTTGCTTAACCATTGAATTTATTTTTTCATAAAAGGTCCCTCAGGGGGAAGAAATTTTGTAATTTATGGGTCTG
AACGTTTTTTTGCAA
>LE_HBa0208H09_SP6_371108 (trimmed for quality and cloning vector)
CTCATTTCTTATTCTTTTCATTTTTTCCTTGAGCTTGACCGAGAGGTTGTGGGTTCGAATCCCACTCCTCTCATTTCTTATTTTCATATATACTTTATTT
TTCAGCCAGGAGCATGGTCTAGTTCCCCCGTACCACATTGTTTTTTACTTCTTTATTTCCACCACATTTTTTGTGGTTAGGTCACATGTTCGACCCTCAG
TGACCTCACTTATTTTTCTTCGCTTTTCATGACATTTTAAACAACATAAATTGGATGAAATTAATCAACAAGGTGCTTGAAATTTGAGTTACATTTTCAA
CTTCTTTTCCATTCCAATATTCGATAGTACTTAGGAGAATTTCATAGTGCATTTAGAACGTTTTAGTTGTGTTTTCATAGTTTCCTTTAAACAAGAGATT
TTCACTCAAATCAGCCACATTTCATCTCATATGAAACTGACGATTTACATAAACATGTGTACATGAAATACAAAGAACTAACATGCCATTTAAATTCCTA
CACCGTTACCAATAGCCATGACAATGCACCCAAACGCTTGTAGTCACATTTTTAGAGAACATAGACATAAGTCACATAATTCCGAACATACATACAAAAA
TATGGGTATCACTTAAACACGTTTTATCCTATTTTTCTACCAACAAGCATAACAAACCTAAAATTCAATGGGATCTAGTGACAGGGACATGAAACGGGGA
AAGAACCCTAGTTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.940935
Expected error %
0.127201
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0208H09
Clone
Clone name
hba-208h9
LE_HBa0208H09
C08HBa0208H09
P208H09
Clone type
BAC
Contamination
none
Estimated length
68,148
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found