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Clone Read LE_HBa0209B14_T7_371391

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0209B14_T7_371391
Primer
T7
ID from Seq. Facility
LE_HBa_209_B14-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 3079 raw
Sequence
>LE_HBa0209B14_T7_371391 (raw untrimmed)
ATCATCTATCTACGAGATGTNGACTTACTCACTANCGTCGACTGGNTCACCTGAGTGCTNACACACTAACTGNCAANCTGCACTGATCANACTACCCGGC
TCACTGCGAACATNCGTNTGATAGCCACACTNTATTTACCGCACTATNCGACTCACACGATCATCTNCNCTCGATNACCAGTATNCCATNTGCCGTGACT
ACTCNTGGTACTACCCACATACCATGCTACGATCACTATCGCGTACGGTCGGGCACTTCTACATNATACATGCACGCTATACCGCTCTACATCTTCTCGA
ACTATACGCGCGCGCGGACATGCTGTTCGACACTTCGCTCTGTCTGACTNCNCGCAATACACCAGTCACCTGCATACTCTACCTACATGTACTCATAACA
CATTGTCATACATCGCTATGAACATCACATCATATATAATTNANCATATCTATAAACCTCTAAACATTCTNCGACTACTTACTGCTCTTATGTACAGATA
CACATAGTCTCTGCAATCTTAAATAACGCGACGCTGCTATCGCTACGCTGTCGCTCTCTGCCAACTATCTCAACACTACCTGCTCATGCACCCCGGTTCT
GATCNACACTACTTACACTCTCTACCNCACAATACATCCACTCATATATGTCACTGCTACATGATCATCTATGAGTCTGCATCAACCTACCATAGTANTG
GCACAACCTACTAGCATGCTTACTCGTTACACCTCTCACGCTCTACTCTTGTCGACCGATCCAATACGCTACNTCTTATCTGCAACTCAACTATACTTAG
GCTCTCATGCAATGCNACATACTCTGCTCATACATACTACACGATACATCTCTGCGACAATCACACATCATACTGTGCTGACTNCGCTCANCTCACTGTG
ACACACACNAATGAACCACCACAGCTCCTTNGACTGACGGACACACATGATGCATATACATGTCACCCNTGANANGTNTGATCGACATCNCTGTGANATC
TACTACAACACACTTACTATACTACATACTTGTCACTCTCGTCATGTAGACTTATGACATCTGTGACCACCATATGAANCACTACCTATCGACGATACAG
AATCTATCCTGTTACAACTCTCTGAACTCACATCGTGATACCTGACGTACTTATAGAAGCTATATCAGCTCACACTACACACTGCTCTAACTACTTTCAC
ACTTGCACCATCTATTCTGTACTATCTCTACACTCCTTACGGACTCGATCTCACATTCTTGCTTTATCACTGTACCTCTTAGCCACTCGGGACATACACA
ACTCACATCATTCGCTGTATCATACTACATATACTTCACCATCACACATCACTACCTGCATGACTATATGCACTGATCNANACCTCACGATACACTTGAC
TGCTCAAGCCTCGTACTCCACATACCCGCCTGCCAAATAGTACATTGGATCTTACTCACTAACGCTATATTACTCTACTGTCTACTCTTAACCACAATCT
ANCCATCTCGGACTCTCTCATGTATCTAATAGAATGATATCTTCTACCTACTACTTCAGATGTTAATCTTCCACTTNCATCACTGGCATCTGCTACTCAC
CACATCAATCACATAGTGGTCTACTTGTACTCACTCATTCGCTTACCTTATCTATACTATTNANTGCACTGCNCGAACTTGACACTNATGTCACATATCA
TACTGCGAATACACCCTCTCTACTACACAACAATGTCTGAAATCCTATTCTCACATNTACACGTCGCCTGATACATATATACACTCAGCTGCACTACACA
CTCACTACAACACTGCGGTACTACTCACGATCACTCTCATCTCGCGTACATGCACATGTCACTACATACATCATGCAGACACCATCTATATGCACCTCAC
CTCTACATCACTGAGCATGATCGATAAACATTACTNAACCATGCGCTGAGTTCTGGGCGACTCTCATCTTCTTCTTACTATTCACTGCCTCTATCGTGAC
TAANCTCAACCTGCATATCACATTCCTCGTATGTACATCAACCCNTGANTATCTCATCGTACAGCATATACCCTGCTCATTTCCATACTATACGTCTGTG
CGCTNACTGCCTCTGATATAGTCACATCACTAACACACTCACAATCTTCACCTGCCAAACNCATCTTATGCTGTATACATCTCTATCATATGTACAATAC
TCTTACCTACATCTANTNACCGTATGTCACACTCNCCTNATCATCATCTCAATGCACGATGCTATGACATACTATCGCTACTNTGATTCTCATACATAGA
CGGCACTGACACACTACTACNCATGCCTCACTCTACGATGTATACTCAAACTGACTATGATATCTACATGCTNCGACACAANCACTCCATCTCCTCGCCA
CTCTTTAATTACACTACGATCGCACTGACTGCTGATATGCCTCTCACANCACATCCTCGTTANTCTACNATCCTCAACACTATATGCTAGATTCCTTACT
CTATATGCTCACACATCACTTCTGCTCCATGCGCTTACACGCNGCTACACTACACGTCTATTCACATCCCTCTCTATTACCTGCTGACACGCTGATGACA
CATCTATATACCCACACTGATATCCTATTCTCGCCTACCATATCTACCTCTACTGCCATACTACCGTGCGCACAACAACTCCACTACGTGATGAGCCTAT
ACGCTAGTGATGTACGCTCTACTCGCNCCTCGACAGTGATACATTCTATATACATGCACGCTCACAGCTATACTCTGCGCTACTCGTCTCTACTCTGCAT
ACGCTAATTCACCATCTACTGCTGTGTACCTCTTNCTGAGACTNCTCTACTGACTTNTCTCTACAGCANCTACTATATATCTGCNCTACACTTACATCGC
TATCACTGTCACTAGCTTGCCCTACTCATACACTCCNGTGCGTATCTTCTATCTGNCTATGACTGATATCATNGATCTGCACGTAACAGCTACGCGTGNA
CGTTCNCATAGCTATCTCGTNGCTACGTCATCTTNGTAGATGCANCCTCACTATACCTNCACTACAATGTTGCCCTTCG
>LE_HBa0209B14_T7_371391 (trimmed for quality and cloning vector)
TC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for contaminants
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.9031
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0209B14
Clone
Clone name
hba-209b14
LE_HBa0209B14
C07HBa0209B14
P209B14
Clone type
BAC
Contamination
none
Estimated length
144,029
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found