Clone Read LE_HBa0209F13_SP6_371580

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0209F13_SP6_371580
Primer
SP6
ID from Seq. Facility
LE_HBa_209_F13-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
6 trimmed for vector and quality, 979 raw
Sequence
>LE_HBa0209F13_SP6_371580 (raw untrimmed)
TGTACATGGCGATCTTAAAGTTCTATACTTTGGAATTTTCGGAGGGTCATTTAATCTTGATGAGAGTTTCCCCCATGAAAGGGGTGGTGGGGTGTTGGTA
ATCGACTTCCGCTAAGCCCATTGTTGTATTGGGCCGTTTGAAGCTCTATGGAGAGTATGGGAGGTGGCTGATGAACTATCCTTGCCTCCATGACTGTCAG
GAGTGCATCCGAGTATTTCCTGTGTCTCGTGTGCCAGATACCTTGGGGATAGCGATCTACATCTTTCGTTGGGATTCCGATCCTGCATTGTTGATACTTT
CACCTCTGAGGAGGAGCCTGATACCCTTCTTGACAGGGAAATCCCCACCCCGA
CGTTAACGTTGATTGCTTCCTCCATACTTCCCTTGAACAATCTACCA
CTCTAAGAATCCCCTTGCGACTAGGAACTCCATATGCTGGAACTATACCTGCATTTTTATACAGCTGCGGGGTCTCCTTCGCGCTCCTCATTTTCTTGCT
ACGATCATTCGATGACTAACCAAAGGCAAAATTGATTACCAATTGTACTTTCCCTGTTTACACCATTTGAGCGTCATATTTTATACCTGAAAGACCGCCC
TTGTTCTACTTTTTCCTCCCTGTTACCTTCGCGTTTACCTATTAATCTTTGAGGGGGTGTCCTTTTCTAAATTTCCTTAAATCTCCCAATTTTGGTTTTC
AAAGTCCACCCTTCTTATCTTTTTTGACCTTATGCAAGTTCGGCCTCTATTTTGGTCCAATCTGACGTTCCTTGGTTCCTTCTCCGAATTTAGTCTTCTC
TTCCTCCTTTTCGGTTTCTTTTCTGCATTTTTCTTTCTACGTCTTCCTTTCTTGTCTTTTTTCTCCCAATTCTCTTTCATGGTACTCATCCCCCACTCCC
CTTCTTGGCTCATTTTCTCTCTTCCACCTCTTCTTTCTAACCCAGTCTCTCTCCTTTTTTTCAATCCCCTAATCCTCCG
>LE_HBa0209F13_SP6_371580 (trimmed for quality and cloning vector)
CGTTAA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for contaminants
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.712641
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0209F13
Clone
Clone name
hba-209f13
LE_HBa0209F13
P209F13
Clone type
BAC
Contamination
none
Estimated length
99,394
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found