Clone Read LE_HBa0209F24_SP6_371602

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0209F24_SP6_371602
Primer
SP6
ID from Seq. Facility
LE_HBa_209_F24-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
120 trimmed for vector and quality, 943 raw
Sequence
>LE_HBa0209F24_SP6_371602 (raw untrimmed)
GGGCCGCTCTGTAAGTTGATGTTGTTTTGTTGATTTTCTTCTTAATCCTTCGATGGTCTTGTTTAGTACCTCTTCATATAAGTCGGGAGTGAATCCGGGG
CTCTTTTTTATAAGAGCTATTCTAACACGCAATGATAGATACTGGCTTTTTCATTTAGGCAGGTTCCTCTCACATCATTCTAGTACTTCATTCCAGAC
TT
CCACCTCTTTGTTATTTTTACCAAGGGAATTCAAGATATTTTGTCTGGAGGAAGGCTACCTGACAGCCTAATTTATTAGCAAACACCTGCATATTTTCCA
CCTGATGAACTGGTATAAACAACTATTATGCTAATTGACATGCAATCCTGATATTCCTTCATAGCTAGTTAAGATGGCCCTCAAGTGTCTTATTTGATTA
TGTTCAACTCCATAGAATACTAATATGTCATCTGCATATACCCGCTGTGAGATCTCCACAACCTCTCCCCTATTTTCATTTGCACCAAAACCTTGCTTCC
ATATGTTCTCACTTGCTTTCCTAATCATGGTATTTAAATCCCTTTAATTTAATGATAAATAAGACTGGTGAAATAGGGGTCCCCATGTTTTCCAACCTCT
TTTTTGATGAAAAAACCTCCTTTATGATCTTCCTTTGTCCATTAATGGGAAAATCTTGCGATCTCTTATATTATAAAATCATCAATTTAATTTAAATAAA
TTTATTTTTCTCAAGCCCCCATTATATTTCTAAAATTTTTTATCTTAAGTACAAACTAATTTTATAGAGGTCGATTAAATTATTCTAACATTTCCACATA
TCTTGATTAAATAAATTCTCAGTGTTAAATGTTTTTATTTCCACCTATATTATTCTCCAATAAACTCATTTATACAAAAAATTATAAAATACATTTATTT
TTTTTCACATTTCCATCATATTAAATAAAACACTCATTCTGTT
>LE_HBa0209F24_SP6_371602 (trimmed for quality and cloning vector)
TTCCACCTCTTTGTTATTTTTACCAAGGGAATTCAAGATATTTTGTCTGGAGGAAGGCTACCTGACAGCCTAATTTATTAGCAAACACCTGCATATTTTC
CACCTGATGAACTGGTATAA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.937556
Expected error %
0.445484
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0209F24
Clone
Clone name
hba-209f24
LE_HBa0209F24
P209F24
Clone type
BAC
Contamination
none
Estimated length
99,203
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found