Clone Read LE_HBa0210A16_T7_372099

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0210A16_T7_372099
Primer
T7
ID from Seq. Facility
LE_HBa_210_A16-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
17 trimmed for vector and quality, 754 raw
Sequence
>LE_HBa0210A16_T7_372099 (raw untrimmed)
GTGAGAATACTAATAAGTAATGTACCTCTGTGTTCTCATTCGAGTGAGACCTCTCGATTGTCTCAGCATCTCCCCGTTCATCAGTTACTGCACGTACCTA
GAAAATAAAGGTTGATTAGTTACCTATTTCCTACCTTAATCATAAGAGTAGATTGATATTGCGGTTGAGTGCAATTGATTGCATAATATTGCCTTATTTA
GGCGTAAGACTCATTGTATTAGTACCCATATTCATGGAGTGGAAATTCTTCACAAAAATAGAGAAACTTTTTCTTCTTGAAGTCTTCAGGGTTTCAGAGT
TGTTGGTGCATTTGGAGGTAAGACTTCTCCCGCATAGCACCGGAGCACTAGGGTTCTTATTTTTTCCCCAAGAAGAAGTTGAGTTTTCTCATCAGTTAAC
CCTGTCCTCGTCTAAATTAATTATCTATTAGTGCTGTGAAAAAGACTATCACTACCTCAAGGTAGTGCTAGCTTGATCCCAGCCAGACGCTGCCATAAAC
CACCTTACGACGCACCGTCATTGCGCACTATTAATTCCTACTTCACCATCTCCATCTCTCTTTCCGGTAACTTCTAAAATTTAAGTTTTTCTCATGAGGT
CCCCAGCGCTTTCATGGGCAACCCTTATCTCCTAAAGACCTACTTCTTTTTTCGTGCCAAAGAGGACAGTCGAAAGTATTTTTTTCGGACGCCATCCCGG
CATTATATGGTGGATTGGGTTGATGTTTAAAATCCGGGATCTTTTTTTTGCTAA
>LE_HBa0210A16_T7_372099 (trimmed for quality and cloning vector)
GAAACTTTTTCTTCTTG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for contaminants
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.636859
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0210A16
Clone
Clone name
hba-210a16
LE_HBa0210A16
P210A16
Clone type
BAC
Contamination
none
Estimated length
88,275
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found