Clone Read LE_HBa0210H16_T7_372267

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0210H16_T7_372267
Primer
T7
ID from Seq. Facility
LE_HBa_210_H16-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1473 raw
Sequence
>LE_HBa0210H16_T7_372267 (raw untrimmed)
TCGAGGTCATGTTTATCTCNACTAGCGACTTTATATCGTCGTCTCGTCCTTCTGTCTGAGCTCGACGGTCGCCCTACGTACTATTCATGATGGCTNGATA
TAGTATACACTACTGCTTGATGGTCGGACAGCGTTGTCACATGTATGCTCATCGTACTCTAGTCGCCGTGCTCGATATTGCACACGANCCTGCTCTTGTC
GCCTAGCTAGTAGTATACTATCTATGCAGCTCGTCGTAGAGCTATAGCCGTCGTATCATACTCTACTTCTTGTATCTNCTAGCGATCTTGTTAGTGATGC
TGCATGATCTAATGTCACTACGTTTGANACCTGANGNTAGTGTGTACTATCGAGCATGCTGTACCANCGGCANCGCTCCGTCTGTGTTAGCGTGCTANGA
NTAGTATAGACGTTAGCAGTGCCTCTCTGGTGTGTGNTCACTGGTACTNGTACGCGTGCAAGGCTTCTACGTCAGACGAACTATGAATGTGTGACTGCAG
GTATNGTCACTTATCATGACTCTTAATACCTCTAGATGTCTCGTATAGGCATGCGTTTCTCATCGTCTGTATGTGACGTACATGGTACTAGATCTATCTA
GCTATCTCTGACGTGTGAGTGCTAGTGTACACTAAGGATATCACANCTAGCTATCGCAATGTATTACTGGAACTGACCTAGTCTCGNGAGTAGTANACTA
GTTNCACGTCTATGACTGTTGCAATAGANTCTCTATTGTACTCCTCTACTTTCGTAGCTCTGCTATACTCTATGCGNCATGATATGGACNCTGTGATGGC
GCTGTACGCGTTGTGCANGTATATGTACTATGCTATTAGAGTGCCTNCTGTGTCTATCTGCTCGTTGATCTATTGACATGTCTGGGCTCGCCGGCCTGCT
CGTACTAATCTATACACAGCCTCATCGTCTGTACTNCTGATGAGTGTGACGTATCTATACCGTCGCTGATATGTATCATCGCCAGACAACTATAACGGTC
AGCCNTGACATCTACNTCTGCGCTGTGGTCTATTCTCAGAGACTGTCTCTGGCTGACTGTGATNTAGCAATCGTCGACTAAACATAGGTCTGAATACTAC
GTGCTCGCGTAGAGCGATACGCCATGATGTACTGTTGCTACCGGCGGATAGATAGGTTATGTGAAATAGCATGCGTCGTGCATACCTCCGTATTCTGTGA
TACAGACTCGCTAGCATATGCGATCCATCGGTCTCAGCTACTCTGAGAACGTGTCACCTCTGCGTGANTCTACGGAACTAAGCAGTCTGATGTCTAGTCA
CTATGTCACGTCGTTCACTACTGCAAGATCTATGTAAGCGATAGTAGTTATATCCGTCTTTATCCACATGCTGTAGCTAGCGTGCCCTCCGCGAGTGAGA
GTACCCGTAGGATTACTGTATACTTACAGATTTCGCATGTATACTCGCTATATCCTAATTCACTGAGTCGAGN
>LE_HBa0210H16_T7_372267 (trimmed for quality and cloning vector)
GC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • High predicted error rate
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for contaminants
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
8.23994
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0210H16
Clone
Clone name
hba-210h16
LE_HBa0210H16
P210H16
Clone type
BAC
Contamination
none
Estimated length
113,651
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found