Clone Read LE_HBa0113D24_SP6_37438

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0113D24_SP6_37438
Primer
SP6
ID from Seq. Facility
LE_HBa_113_D24-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
218 trimmed for vector and quality, 625 raw
Genbank Accession
Sequence
>LE_HBa0113D24_SP6_37438 (raw untrimmed)
CAGGCACCTCCCTATCATATAGGAAAATCATAACTTTTTGATTTGTTTCCAGGGAATAACATCCACAACGTAGTGATTGAAGAGTCTTGATCTCTCCATA
GTTTATTGATTTATTGTCTTTCAAGGTTTGCAGTTGATTTATTATCATGTTGTCCAAATACTTCGACTCTTCAATAGAGATGATAAAATAACTAAAAATT
GAATCTGCTGATCATAGAAGTTTTATTGTCGCGTTCATCCTTCAAGTTTTCACCATATTTCCTCCTCTATGTTACCCCGGGGCTCATGAGCGATACAGTG
AAGCAAAATATCTTATTGAATGTCAATAGCTTAGAACGAGGTGAAAGTAAACAGAGATCTTGATATGTAAAACACTAATTTCATTTGTTGAAATTGCATC
CTGGTTAATGGTGAAACCATTTCTAATAGACTGTTCACATGATATTCAAACTGGAGTGATTCTACCGTCCATTCTTTTTATATAAAATATTTGAACAATT
GATACTATTTATTCTTCTATAATCATTCTTGTCGAATTTTCAAATATAAAGGAAAATAAACAGGACAGACTTATTCCTTAACTTTATTATTCCTTTTTCC
TCGGGTGTCTGAACATTCATCTGTA
>LE_HBa0113D24_SP6_37438 (trimmed for quality and cloning vector)
TTCCAGGGAATAACATCCACAACGTAGTGATTGAAGAGTCTTGATCTCTCCATAGTTTATTGATTTATTGTCTTTCAAGGTTTGCAGTTGATTTATTATC
ATGTTGTCCAAATACTTCGACTCTTCAATAGAGATGATAAAATAACTAAAAATTGAATCTGCTGATCATAGAAGTTTTATTGTCGCGTTCATCCTTCAAG
TTTTCACCATATTTCCTC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.930201
Expected error %
0.617725
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0113D24
Clone
Clone name
hba-113d24
LE_HBa0113D24
C12HBa0113D24
P113D24
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found