Clone Read LE_HBa0008O03_SP6_3748

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0008O03_SP6_3748
Primer
SP6
ID from Seq. Facility
LE_HBa_008_O03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
680 trimmed for vector and quality, 958 raw
Genbank Accession
Sequence
>LE_HBa0008O03_SP6_3748 (raw untrimmed)
AATAATTAATGGTTTCCTTTAGCTCTGTACAGTCAGAGAAGAGAGAAGAGAAATTATTTTTATGGGGACAACGCCGGCAAGTCGTCCGCTACATCGCCGC
CGAAAGAGAAGAAGAGTTGACATTTGAGCAGAGAGAAGAAGAAGAGTTGAGAAGAGGAAGAAGAAGAGTTGAGAAGAGAGATGTACTTTTATTGAAAGTT
TCAAAAACCTTTTTTCTAGGAACCAGCTTTTTTCTTGGAAGTTGGAAAAAGTTTAAATATTAATTTTTTTTTAATATTGACTTGTTATTTGGAGTGTGGA
AGAGCCACATAAAATCAATACAGCTTTTATTTTATTTACTCCATTTTAAAGTTAATAAAATCAATACAGCTTTTATTTTATTTTAAGGAAAGTTGAGGAT
ATAAATCATGTAACAAGAATATAATTCATTTAATTTATGAAAAAAATATCTATGAATTTATAATGGGATGAAATACATCCTTTCACTGTTTTTAAAGAGA
TTTTACCTTTATGAATTTAAATTAATTAATTTTAATTAAAAATTTTTAATAAACTTTATATAATTAATCAAAATTATTGAATTTCTATATTAATGATTAA
TATTAAAAAAGTATAGCTTTTAAAGAGAGAAGAAAAAACAAAGGGAATGCACAAAGACAAGATGAATTATGATAGAATATTTGAAATTTATCTTCGAGGA
TTCAAATTCAAACTTAATCATATTAATATCAATATAAATATCCCATAAATCTAAATTTAAATACGGTCTCAAATACTATAAATCATTCCATTAGCTACCC
TTTTGTGGTGTTTTTAATTGGGTTGATTTGGAGTAAAAAAAAGGTGAGGTTCAATCCTCCTAATTTTTTTGCCCCCTTATTTAAAATATATTTTTTTTTA
AAAAAAATATTTATAGTAATTTTTGGGGATAATATTTTTGTTTGGCAACAACATAAAT
>LE_HBa0008O03_SP6_3748 (trimmed for quality and cloning vector)
AGAAGAGAGAAGAGAAATTATTTTTATGGGGACAACGCCGGCAAGTCGTCCGCTACATCGCCGCCGAAAGAGAAGAAGAGTTGACATTTGAGCAGAGAGA
AGAAGAAGAGTTGAGAAGAGGAAGAAGAAGAGTTGAGAAGAGAGATGTACTTTTATTGAAAGTTTCAAAAACCTTTTTTCTAGGAACCAGCTTTTTTCTT
GGAAGTTGGAAAAAGTTTAAATATTAATTTTTTTTTAATATTGACTTGTTATTTGGAGTGTGGAAGAGCCACATAAAATCAATACAGCTTTTATTTTATT
TACTCCATTTTAAAGTTAATAAAATCAATACAGCTTTTATTTTATTTTAAGGAAAGTTGAGGATATAAATCATGTAACAAGAATATAATTCATTTAATTT
ATGAAAAAAATATCTATGAATTTATAATGGGATGAAATACATCCTTTCACTGTTTTTAAAGAGATTTTACCTTTATGAATTTAAATTAATTAATTTTAAT
TAAAAATTTTTAATAAACTTTATATAATTAATCAAAATTATTGAATTTCTATATTAATGATTAATATTAAAAAAGTATAGCTTTTAAAGAGAGAAGAAAA
AACAAAGGGAATGCACAAAGACAAGATGAATTATGATAGAATATTTGAAATTTATCTTCGAGGATTCAAATTCAAACTTA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.881198
Expected error %
0.127189
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0008O03
Clone
Clone name
hba-8o3
LE_HBa0008O03
P008O03
Clone type
BAC
Contamination
none
Estimated length
124,035
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found