Clone Read LE_HBa0214L23_SP6_375344

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0214L23_SP6_375344
Primer
SP6
ID from Seq. Facility
LE_HBa_214_L23-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
82 trimmed for vector and quality, 822 raw
Sequence
>LE_HBa0214L23_SP6_375344 (raw untrimmed)
NNCCAGTAGAACTTTATATTATGGCGTCTTTTGTAAAAAAAGTTGTAGTACTTTAATTGCTTATCGATAAGGGGAAGAGAATGTGGAGCACGAATTGATA
TATGCCTTACAGGGGGNNGACNAAAGAANCNNNNNNNANANANCGACANNNCNGGANNNACGNGCCCACCNNNGAAANNNACAAAAANNNNANNNNNAAA
AANGNNAAGAGGAAAGAACAANNNAANCNNCAAAANAGCNAAANANNCNNAGNAAAAAAAAAGNAAAGNNGAAAGNNAAAGNNNAANAGCNGGGNGAACN
ANNAANCNNNNNACACACNNNCGAAGGNCACNAAANGCACANAAAGGAGACGNNACACANNNAGGGCNGCANCAAANANANANGGAANANNANAANNNGA
CGAANANNNNNNNNGANCGANAANNANACCGCGNAAAANGGAANNNNNANAAGCAAAGGCCANGNAAACNACGCGNACGAGCANANANAANNCANAAACG
AAGCCCNACANNAACNCNANANCNACNCGGGAAANNANNNNNANGGNNGNNANNAANNGGAANACNNNNNAANGAAAAAGACAAANACAANAAAGGGGGA
AGAGGACGAGAANAAAAACCACGCACGGANCCCCCGGCCAAAANGGGGAGNANAGGGAGAAGAAAAAANAGAACCCCAAACCGGNGGGGAAAAAAAAGCC
CCAGCAAAAAAAAAAGGGAAANGGGGAAANNNCCCCCCCAAANAACCCCAAAGGGCAANCCCAAAACCCAACNAAAAAAGGAAAACNNAAGGAAAAAACC
CCCCCCCCCAAAAAAAAAGAGN
>LE_HBa0214L23_SP6_375344 (trimmed for quality and cloning vector)
ATGGCGTCTTTTGTAAAAAAAGTTGTAGTACTTTAATTGCTTATCGATAAGGGGAAGAGAATGTGGAGCACGAATTGATATA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.857209
Expected error %
2.13093
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0214L23
Clone
Clone name
hba-214l23
LE_HBa0214L23
C02HBa0214L23
P214L23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found