Clone Read LE_HBa0224I11_T7_377097

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0224I11_T7_377097
Primer
T7
ID from Seq. Facility
LE_HBa_224_I11-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1682 raw
Sequence
>LE_HBa0224I11_T7_377097 (raw untrimmed)
TTATAGTAGGATTGNAAACGTGGGAGAGGGAAATGACATAGACAGTTAAAATGGCTATTTATTNNAAGGGCAAAGCGCTTACTTATTTAAGGGGGAGGNC
AAAANCNNNAAGAGAATAAGCAATGGCGAAGTTTTATTTAAAAAAATCTCTCTCCTCGTTTAGAAGGAGGAGGAAGNAAAANTGTAANGGTTTTGGGTAA
AAGTTGATTAAGAAAAAAGTTAGGGAAAAGAAAGATAAAGTTGAGGAAGGGGAGGGGGAAAAGAAGAGGGGAAAGGAAAGTATTAAGAGGAAAAGGGTAA
TAAGTTTTGAGGGGGGAGGAAGGGTAATGATAGTATTATAAGTGAGGGAAGAATAAAGATGGAATGGAGATGAATAAGAGAATATGAAAGGAAGGTATGG
AGAGAGGAAAAATAGAATAAATGAAAAGTGGAAGTGAGTGAGGGTAGTGAAAGGAAAAAGTGGTGAAGAAGAGTGTAGCCCCTAATAAGTAGGAGGGTGA
TATTTTAAAGAGGAAGGAGTGGAAATAAAGAAAGGGAGAATAAGGGGGATGGTAGGGTGGAAAGGAGAGAAGTGAGTAGGAGAAAAAAGAAGAAGTAATA
GGAGGGAGAGATAGGGAAAAAGGGTAAAAGATGGGAGAGAGGAGAGAGAAAAGGAGAGTAGATTTGGAGGGGGAAGAGATTAGGAAGAGAAGAAGGGAAG
GAAGAGAATGATAATGAATGGTAGAAAAAGGGGAATAGGGTGAGGGAAAGGTAGATTATATTATGAGGTAAAAAGAGAGGAATGAGATGTGAAGATAAAA
GAAAGATGGAGAGGGATATGAAAAGAAGGAAGGAAGAGAGGAAGATGGAAAAGAAAGATGAGGGGGGAAAAAAAGAAGGATGAGGTAGTTGAGAAGAAGA
AGTATGAAAGGAAAGGGAGGAGATGAGGGATTGAGATGGGAATGAGACGGGGGAAGAGGAGGGTCTTTGTGTATGAAGTAAAGAGATGGAAAAGAGGTGA
AGAAAGGGGAGGAAGAGGAGAGAGAAGGGAGGAGGAAGGAGAGGGATGATGAGTAGATAGTAAAAGGAGTTAATAGGTGAGGGATATAGAAGAGAGAAAG
ATGAGGAGGAGAAAGGAAGGAGGTTAAGAGGGAGGGAAAGAAGTATGAAGTGGGATGAGGTGAGAAATAGGTTGATGGAAGTGTATTATAAGGGGAGATG
AGATTGGGATAGGTGGGAGGAAAAGAGATATAAAAGAGGGATGAAAAGGTATTGAGAGATTATGAGAGTTGTGAGTTGGTGAGAAAGTGATGGTGAGAGG
AGTGTGAGAGAGATGAGGAGTGGTTGGAGGATGGAAATGAATGATAGAAAAGAATGAATATAATGTGGGTGGTATGAGTAAATTGGAAAGAGAGTGGAAT
GAATAGGAGGGGAAGTAGAGGAAATGTTGAGAGAAAAGATATAGTAGAGAGAGAAAGAGAGTGTAATGAGAATAAGATGAGATAAGAGAAAGGAGAGGAT
TAGTATAAGAAGAGGGATGAAAAGAAGAGAAGAGTATGATAGATAGAAGGNGATAAGTGAGAAGGAGGAATGAGAGAAGTGAGTGAGGAAGGAAGGATAG
TAAGAGAGTACAGATTGGTAGTATGGGTGAAGAAAGAGAAAGATTGAGAGGGAGTGTGAGAAGATGAGGTAGAGAGAGAGAA
>LE_HBa0224I11_T7_377097 (trimmed for quality and cloning vector)
GG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • High predicted error rate
  • Short cloning insert
 Warnings:
  • Not screened for contaminants
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
25.31
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0224I11
Clone
Clone name
hba-224i11
LE_HBa0224I11
P224I11
Clone type
BAC
Contamination
none
Estimated length
111,744
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found