Clone Read LE_HBa0240D15_SP6_377546

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0240D15_SP6_377546
Primer
SP6
ID from Seq. Facility
LE_HBa_240_D15-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
660 trimmed for vector and quality, 925 raw
Sequence
>LE_HBa0240D15_SP6_377546 (raw untrimmed)
AGCCTTTTCGGGTCCTCTTTTCTTCTCTTTTCTCTTCTTTTATTCTTTTAGGGCTTCTTGAACTAACAACTAAAACAATAGGTATTTTTTAGGATTCTAA
AACCTAAACAAAAGCAATACACCCTTAAAATAGTACTAAACACGAATTAAATCTGATTGAGTAAGGAAAGGACCAAAACATACTTCACTATTTTTGGCTA
ACTATCCTTAACAATACAACTTAAATTCAAAAGGTCATATCTCACTCATCCAAACTCAAAATTAAGCAAACTCGACGACTTTGGAAAGATAATTCAAATT
TATTTCATATGGTATCTTGTAGCACACCTAACACATCTTGTGCTAGGAGTTATGATCGTTTGAAGTTGGACCAACACTCATACTTTGCTTAACTTGCAAA
TATTTTAGATTTTGCAATTTCCAATTAAATTCTTTTTTGAACTCCTTGTGCTACATCTAGTTATTTAAGCTTAATAGTTAAGAAAAATTTAATTTCTTGT
AAAATTTCACTCATTACGATGAATATTTCGAGTCATAGTCTGAAAATATTTTCTGGGGTGTTACAAATTTGTGTCCATGTAGTGTTGATATAAAATATTA
ATTCATGAATAATTTGTTTGTTACAAGTACCAACACTAGTTGATCCGATTGATGGAAAAATTGATTTTTTTGCAAGGTCGATTTGTGTTCATCTAGTGTT
AAAAGCCTTGAATTTAGAAATATATTTGTTAAGCATAAGTACCAACCACTATTGATCCTACTGATGAAAAAATTATTTTCTCAAAGTTTGAATCTGGGTC
CATCTAATATTGGATTTAAACCTTTAATTGGGAAAAATCCTGTTGTTAAACAAATGTACAAATACCAGTTGATCTTTTTATGACAAAATTAATTTCTTAA
AAATTGATTGTTCCTCCAAGGCTAA
>LE_HBa0240D15_SP6_377546 (trimmed for quality and cloning vector)
TCCTCTTTTCTTCTCTTTTCTCTTCTTTTATTCTTTTAGGGCTTCTTGAACTAACAACTAAAACAATAGGTATTTTTTAGGATTCTAAAACCTAAACAAA
AGCAATACACCCTTAAAATAGTACTAAACACGAATTAAATCTGATTGAGTAAGGAAAGGACCAAAACATACTTCACTATTTTTGGCTAACTATCCTTAAC
AATACAACTTAAATTCAAAAGGTCATATCTCACTCATCCAAACTCAAAATTAAGCAAACTCGACGACTTTGGAAAGATAATTCAAATTTATTTCATATGG
TATCTTGTAGCACACCTAACACATCTTGTGCTAGGAGTTATGATCGTTTGAAGTTGGACCAACACTCATACTTTGCTTAACTTGCAAATATTTTAGATTT
TGCAATTTCCAATTAAATTCTTTTTTGAACTCCTTGTGCTACATCTAGTTATTTAAGCTTAATAGTTAAGAAAAATTTAATTTCTTGTAAAATTTCACTC
ATTACGATGAATATTTCGAGTCATAGTCTGAAAATATTTTCTGGGGTGTTACAAATTTGTGTCCATGTAGTGTTGATATAAAATATTAATTCATGAATAA
TTTGTTTGTTACAAGTACCAACACTAGTTGATCCGATTGATGGAAAAATTGATTTTTTTG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.923201
Expected error %
0.334014
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0240D15
Clone
Clone name
hba-240d15
LE_HBa0240D15
C12HBa0240D15
P240D15
Clone type
BAC
Contamination
none
Estimated length
103,420
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found