Clone Read LE_HBa0243C06_SP6_377950

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0243C06_SP6_377950
Primer
SP6
ID from Seq. Facility
LE_HBa_243_C06-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
716 trimmed for vector and quality, 1010 raw
Sequence
>LE_HBa0243C06_SP6_377950 (raw untrimmed)
GTATAGCAGGACTAGATCTGGATGAATACCTTCGCAGTGCAATCCACACACCACCCAGCCACACATTTTATGGGTGAAGAGATGGTTGAGATGAAAANTG
AGCTCCGTTTGGGATTAAAACATGTCACCGGGGTTGTAGAAAAGATAAATACAGTTAAATACTATTCTAAACCACCACCACCAAATGATGAATGTTAATA
TGAGGAGGATTCCTATCCGGTAAATGAGCAGACGGGGGGTTTTCGATCGAGTGACCAAGGCTCAAATCAAGAGAATTGGCGCCGAGGTCAAGGAAACCAA
GGTCGAACCTATGGTAACTATAACCGCGACAACAACTTCAACAGGGGTAACTATTGTAACAGAAATGATAGGAATGGGCCCTATGTCCTTCTCAAAATCG
TGAAGTTACTCCTAAGGATGGTGGAGGTAGTATGGCGCGAGTTGAGGATATGTTGCACAAAATGGTGAGGAGGTTCGATGCTAGTGATGAGAAAACTAAA
GAGTTAAGGATTGATTTAGCGGGTATTGGGCAGAAAGTCGATACACGTGCAATATCAGTTAAGCATCTTTAGTTACAAATGACTCAGTTATCTGCGACTG
TGAACACACTGTAATCGGGCACTTTTCTTAGCAACACTGTCCAAAATCCAAAAAATGATGGACAGTGTATCGCAATCACTACTCACGGTGGTAAGCAAAC
CATTGAACCACCTATGCCGTTGAATGAAGAAAAGGTGATAAAAGATAATGATAAAGTGGTAGAGGGTACTAGTGAAGTAGAAAATAACTGTGGAAACAAT
GCTGAAGTGACTCAAAATTTTATCCCATGGCTACACCACAAATTCCCGTTCCTCAATGAATTGTGGAAAAGGACTTGATATTGTAAATATCACCGTTTTA
AAATAAGGGTGAAACACCTTTTTTTAATTGTCCCATTTGGTAAAAAATTTATGAAAAATGGCCCGATTTAGCCTTTTTATTAAAAAATTGGGTTATAAAA
AAAATATGGT
>LE_HBa0243C06_SP6_377950 (trimmed for quality and cloning vector)
CTGGATGAATACCTTCGCAGTGCAATCCACACACCACCCAGCCACACATTTTATGGGTGAAGAGATGGTTGAGATGAAAANTGAGCTCCGTTTGGGATTA
AAACATGTCACCGGGGTTGTAGAAAAGATAAATACAGTTAAATACTATTCTAAACCACCACCACCAAATGATGAATGTTAATATGAGGAGGATTCCTATC
CGGTAAATGAGCAGACGGGGGGTTTTCGATCGAGTGACCAAGGCTCAAATCAAGAGAATTGGCGCCGAGGTCAAGGAAACCAAGGTCGAACCTATGGTAA
CTATAACCGCGACAACAACTTCAACAGGGGTAACTATTGTAACAGAAATGATAGGAATGGGCCCTATGTCCTTCTCAAAATCGTGAAGTTACTCCTAAGG
ATGGTGGAGGTAGTATGGCGCGAGTTGAGGATATGTTGCACAAAATGGTGAGGAGGTTCGATGCTAGTGATGAGAAAACTAAAGAGTTAAGGATTGATTT
AGCGGGTATTGGGCAGAAAGTCGATACACGTGCAATATCAGTTAAGCATCTTTAGTTACAAATGACTCAGTTATCTGCGACTGTGAACACACTGTAATCG
GGCACTTTTCTTAGCAACACTGTCCAAAATCCAAAAAATGATGGACAGTGTATCGCAATCACTACTCACGGTGGTAAGCAAACCATTGAACCACCTATGC
CGTTGAATGAAGAAAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.982778
Expected error %
0.800774
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0243C06
Clone
Clone name
hba-243c6
LE_HBa0243C06
P243C06
Clone type
BAC
Contamination
none
Estimated length
155,942
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found