Clone Read LE_HBa0243O21_T7_378557

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0243O21_T7_378557
Primer
T7
ID from Seq. Facility
LE_HBa_243_O21-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
5 trimmed for vector and quality, 1370 raw
Sequence
>LE_HBa0243O21_T7_378557 (raw untrimmed)
ACATCTTGAATGTTTCGCCGACAGCGTCCCTGTGAAAGGACACTGCACTACGAAATGGGATAGAGGAACCCCCCCCCTATTATGGAGGGGAGGCGATGGA
ACTTGACCAACACTCTAATATACAGGTTTGTGACACCCCCCCTCTGTTTGGGGAGGAATATTACCATTAGAATTTGGAGATAAGTAGTCTGATAGCACTA
TGAATCGCAATGGGTCTATCTCTCACACTATTTCGATTACAGCGCACTACATTGTGAGACGCAGATAGCTGAAATAAGAATAAAGTAATATGAACTAGAC
AGACGCTCAATCTATAGCTCCTACGATTGATCCACTCACTCAAACATTTCACTTACTCAAAATCGCTGAACTAAATCTACCACCAGATCGACTCCCTTAG
TAACGCTATACGACTAGGATAAGACGAGAGACCAGTATTAACAGACCTTCAATATAGTGAAGCATGTGTCTAATCTGACTATGTTACATGACACTTCTCT
CTCTTCAATTCGTACTTGTCTCTTGGGCTAGCAGTGAGACACAGAATAAAAGGTATTGGAAAGACTCCTCAGTCTAATTAGACCACCTACGCCTAAGCAT
GTCAATGAGACTAAGAAAAAAAGGGTGACCTAACATTGAAGGATCCGACAAGTCATTCGATGGCGCAGCGGAATAGGTCTGAAACCGCTCATGCTCGCGA
TTATAATTACTACGTCCAGACAACAGGTGCAATGAAAATTGAAGGCACGGCTCCATCTGACTCTATGAATAATCAATGCATTTTGCAATCACAAAGCACA
GTCGCATACTTGACCGATCATCTTACAAGCTAAATTGATGGCCCTAACATTGTAGAAGCGGCAGTCTAGCCAGACATCAGGAGATATATACACCAAACGA
ATCTGCTCCCTAGATACACAAGTGATCACGATAATCATATACTGGCCGCCTAAAGATAGATGGTAGCTCACCGAGTCATTTAATATACAGTTGTGGGAGA
TACTACACAACAACGCGACGATGCATCAGGAAGCATAAATAAGGTGTACACGACATGTTAGAGCACTTCCTCACCTAGACGAACTGCTTGTCTCGCTGAC
ATAGCGGTACAAAGCATGAGCTCTATATACATGATATTACGACGCAATACACATATTTATCAGATGAACCATATATCATACAGCTCAGTGAGAATCATAA
GGACAAACTAACTCATCGATACAACGATATTACGCCATAGAATATTAAGCGGAAGAAAGTGAATCTTGGACTGAGTACAGACTGAGCTAGAAACTGCGAA
AGAAACTCGAGCATAGAAGACGATGTAATTGCTTTACACCACTGAACAGCTAGTTAAGACATGATTGATA
>LE_HBa0243O21_T7_378557 (trimmed for quality and cloning vector)
CCCCC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for contaminants
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.2577
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0243O21
Clone
Clone name
hba-243o21
LE_HBa0243O21
P243O21
Clone type
BAC
Contamination
none
Estimated length
114,916
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found