Clone Read LE_HBa0244K02_SP6_379343

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0244K02_SP6_379343
Primer
SP6
ID from Seq. Facility
LE_HBa_244_K02-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
744 trimmed for vector and quality, 856 raw
Sequence
>LE_HBa0244K02_SP6_379343 (raw untrimmed)
CAAATCATTAATCAATGTTACTTCAGCCTTGTCTATTCATACTTTCCTTTCTTCAACAAAATGCATTTGTGGAGTTCAATTTTGCAATAAAGGATATAAG
TCACTGAATTTAAGAAATATCGTACTTGTAGGGCCTCCAATGTTGACCACCAATAAGGGCTTCGGCAAAGGTGCAAACTCTTCATGCCAGGTGGCAGCTG
CAGCTCTAAGAGCAGCAAAATCAACTTGATGTAGAGCTCCTACCGTAAGTACCTTTCCAGAAAACAAAATTCATAGTTCAGCAATGTAGGTACAAAAGCT
CTCAACACAGAAATATATTACATTACATGCTAAAACTAAATATAAATGTTGAGGATACCTACAACATGCTTATCAGGTGGTTCTTGGGGTGTTATCCACT
TTTGCAGAAAACGAGGAACTTGTTCCTTTCCTTGAGGAGTTAAAGAGTAATAGTCATGCTTGGGGGTGATTACCATGTCGAACCTGTCCAAACGGGACCT
TGGATGCTGAATCTGAAGTTAAAATACAGCATAGACAAATCAATAAGATTTTCTTCTCCAGACCCAACAATATTCAAGAATTTACAAAAAAAATAAAAAA
ATAAAAAAATACACGGCATACAATCCAAATATGCAATAACAGCTTTCTTTGCTGAACTAAACAGGAAAATCAGCAGCTACAATTAACAGTCCAAAAAATT
TAGGAATACTTCATTAGTCAACCAGCTGTTCAAGAAAAAAAAATTATCACAAAAGTTTAAGAAGTCTCTAGTCAGAACAACTTGTGTACACAAACAACAG
CATACACAGTGTAATTCAATAGGTGGACCCTGGGGAGGGTAAAAGTACCCGGGACT
>LE_HBa0244K02_SP6_379343 (trimmed for quality and cloning vector)
TGTTACTTCAGCCTTGTCTATTCATACTTTCCTTTCTTCAACAAAATGCATTTGTGGAGTTCAATTTTGCAATAAAGGATATAAGTCACTGAATTTAAGA
AATATCGTACTTGTAGGGCCTCCAATGTTGACCACCAATAAGGGCTTCGGCAAAGGTGCAAACTCTTCATGCCAGGTGGCAGCTGCAGCTCTAAGAGCAG
CAAAATCAACTTGATGTAGAGCTCCTACCGTAAGTACCTTTCCAGAAAACAAAATTCATAGTTCAGCAATGTAGGTACAAAAGCTCTCAACACAGAAATA
TATTACATTACATGCTAAAACTAAATATAAATGTTGAGGATACCTACAACATGCTTATCAGGTGGTTCTTGGGGTGTTATCCACTTTTGCAGAAAACGAG
GAACTTGTTCCTTTCCTTGAGGAGTTAAAGAGTAATAGTCATGCTTGGGGGTGATTACCATGTCGAACCTGTCCAAACGGGACCTTGGATGCTGAATCTG
AAGTTAAAATACAGCATAGACAAATCAATAAGATTTTCTTCTCCAGACCCAACAATATTCAAGAATTTACAAAAAAAATAAAAAAATAAAAAAATACACG
GCATACAATCCAAATATGCAATAACAGCTTTCTTTGCTGAACTAAACAGGAAAATCAGCAGCTACAATTAACAGTCCAAAAAATTTAGGAATACTTCATT
AGTCAACCAGCTGTTCAAGAAAAAAAAATTATCACAAAAGTTTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.950177
Expected error %
0.335187
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0244K02
Clone
Clone name
hba-244k2
LE_HBa0244K02
P244K02
Clone type
BAC
Contamination
none
Estimated length
33,358
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found