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Clone Read LE_HBa0244M08_SP6_379548

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0244M08_SP6_379548
Primer
SP6
ID from Seq. Facility
LE_HBa_244_M08-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
625 trimmed for vector and quality, 918 raw
Sequence
>LE_HBa0244M08_SP6_379548 (raw untrimmed)
NCGTTTCGCGGAGAAGGGCCATCTTTTGTAGTGATTCTTGTTCTTGAGCAGGCGGCTACGAGCCGTAGAAAATGTGTGCACCATATTGAAAGGGGAAAAA
AACCCCTTTCTCCAATTTGGGGTCCATAAACGAGAAGCAATCAAACTATTGGTCACGATTGGAGTGAAACTGCCACTGGCAAAAGCCATCGTCTTTTGGG
GTTCTAAGAGGGTTTAAGGCTGATTGAAGATACTGATATAGTTATAGAATTTTGAGACAGAAGGATTTTTTGGAAATTGCGATTATGCCTTTCTATTTTT
GAAAAATTACATCCAACTCCCTTAACTTTTTCATAATGCAACTAAAAAGTTTTTTTTTTAAGAGAAAAAACATTAAGTCACCATACACTGAAGTTGTTTC
AAATTTTCAAAATAAATATCTTAATTTTGTGGGTGTCTTATTACCCACGAAACTATCTAAATCCATAATAAATATACTTTTTTGACTAATTTTAACACCA
CTCGTGTTGTCACAAAATTTGGGCGCGTAAAGGACTTTTCATATAGCTTCAGATCAACGTAAAATTGTCATGTGACACTCCCAATTTGACTTATGTTGAA
AAAATATAAGAACCCGTGTACTAATTTTTTTAAAGCTTTATTAGGAATATTTTTTAATTTTCAAATCTTTTATTCTCATAAACCCCTACCATCATTAACT
TATCTATGTTTCTTGGACATCTATGTCTTCCTTATTTTTTTCAAAACTAAAGGGAGTGGGGTCATTCTAATTCCTTTTTAATTTAGAAAAATAAATAAGT
CTAATGATTTTATTCCTCGTACAAAATCAGTTTGAAATTTGAGAATAGTGGAATTTTAAAAAATCGTTTTTGGGATAAAAAATTGGAAAATGAAGGGTAT
TGTAAATTCAAATTGTTC
>LE_HBa0244M08_SP6_379548 (trimmed for quality and cloning vector)
GAAGGGCCATCTTTTGTAGTGATTCTTGTTCTTGAGCAGGCGGCTACGAGCCGTAGAAAATGTGTGCACCATATTGAAAGGGGAAAAAAACCCCTTTCTC
CAATTTGGGGTCCATAAACGAGAAGCAATCAAACTATTGGTCACGATTGGAGTGAAACTGCCACTGGCAAAAGCCATCGTCTTTTGGGGTTCTAAGAGGG
TTTAAGGCTGATTGAAGATACTGATATAGTTATAGAATTTTGAGACAGAAGGATTTTTTGGAAATTGCGATTATGCCTTTCTATTTTTGAAAAATTACAT
CCAACTCCCTTAACTTTTTCATAATGCAACTAAAAAGTTTTTTTTTTAAGAGAAAAAACATTAAGTCACCATACACTGAAGTTGTTTCAAATTTTCAAAA
TAAATATCTTAATTTTGTGGGTGTCTTATTACCCACGAAACTATCTAAATCCATAATAAATATACTTTTTTGACTAATTTTAACACCACTCGTGTTGTCA
CAAAATTTGGGCGCGTAAAGGACTTTTCATATAGCTTCAGATCAACGTAAAATTGTCATGTGACACTCCCAATTTGACTTATGTTGAAAAAATATAAGAA
CCCGTGTACTAATTTTTTTAAAGCT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.949196
Expected error %
0.374714
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0244M08
Clone
Clone name
hba-244m8
LE_HBa0244M08
P244M08
Clone type
BAC
Contamination
none
Estimated length
91,336
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found