Clone Read LE_HBa0244P19_SP6_379867

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0244P19_SP6_379867
Primer
SP6
ID from Seq. Facility
LE_HBa_244_P19-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1797 raw
Sequence
>LE_HBa0244P19_SP6_379867 (raw untrimmed)
TATATGTGATCTAGGCTATTGGGATGANTATGTAAATTATACGTGGAGTGAATGTCGTGTATAGTGATTTGATATGATATACAATATATATACGCCTTAT
TCCTCAATATGATANAGAGAGAGGGAGTGTGGTCGAGATGATGCGTAGTGTATAGTGATAAATGACATGTGNGTTATGCATGTGATTAATGTAGGTGCGG
GTTCTCTCTCTATTTAGTGAGGGGAGGGAATTGATATAAATATATGTTGATATTGTGAAGATATATGTATAAACGCATTAGGATTAGAGAGGGGATATGA
ATGTGCTGTGATGAAAGATTGCATATTATGTACAGAAATAATGAATGGTGTAGTGATAAGGTATATAATGTTGAGTAGATGATTATAAGGATATGTATAT
TCTATAGGATAGAAAATATATGTGTAATAAGAGATAGAATGTAGGAGAAAATAGGATGAGATAAGTATGTGTGACTGAATATGGAATATAATATTAGTGA
TATTATATTATGTAGAGTGTGAGAGTGGAAAAGAGATTAGTGAGTGATGTAATATAAAGTTAGATATGATAATGAGTGATTAGTGTATTGTGAATTACAG
AAGTGTTAAAGGATTTGTGGTAATAGGTGAATAATGAGATATTATATAAATTTGTGAATATGATCATAGTGATTGGTTGGATTAGATTATATAAGAGAAT
ATATATAGTATTTAAATGAATGAATATTGCGTAGTGATAGGAATATAGTGATTGTGTTAATATGTAGTTTGTATTATGATTTGAGTTTGAGTGTTATGTG
AATGAGGTAGGTCTAAGGATTAAATGGTGAGAATGTAGGAATTAAGTAATGTTGTTAATATTTGAATGTGAGGTAGAATATAGATGTGAATTGTATAGAA
ATTGGTAGTGTAAAAATGAGTGAATATAAGATATATATTGGTGATGTGATAACTGAATATATTAAGGTGGTATAAATAGTGATATGATTAGTGTTTTGTT
TTTATTGAACAGTGCGTGAGAATGCAAAAGAGAGGATGTTTGAGAGTTAGTGATGTAAGTGAATATTGGTTTAGATGTATATTATAAAGAGGGTGTGAGA
GTGTTATGATTGAAAATTTATACAATGAAATTAATATTTAAGGATGAAGATATAGATTGTATGGAATTAGTATATAGATGATAATGAAGAGAATATTATG
ATGTAATATTAGAGAGTATAGAGATGTGATGATTGATTATAGAAGGTATATATATAAATTTTTATAGAATATTCATTATATGTGAATATGAATGAAAGAT
ATATTTGTAAGATTATGCTAAGAATGAGAATTTATTAGGAGGTGAATATGATATATGTTGTAAGTCTAGTAGAAATAGTAGTTGGAGTAGATTAAATATA
AAATTAATGAAGAATATATAATGATATGTGAATATAATTCACTGGTATGAGAGACTATTTTAATATAATAATTGATAGATAAGAGATTGTTTAATAATAA
TAGTAATGATAATATATATATATATTAAAGTAGGAATTGTGGATATGAAAAATATAATAGAGAATGATTATAGAGTGGGTATGTTTAATTAATTAGAATG
TAAATAGAATTAGCTAATACTGTGGATGGAGAGGTAAGTGTTGATATATGAAGGGAAATATGTAAAGTGTGTTGATATAATATTGATAATTTAATAACTT
ATAATTTGTTAGGATGTATTATCTTGATAGTGATGTATAATTTGTAAAGTGAGTGGTGGATATTATGAATGTTGATTATATGTATGGTGAATTGTTA
>LE_HBa0244P19_SP6_379867 (trimmed for quality and cloning vector)
T

This is probably not a useful sequence.

Problems:
  • Low complexity
  • High predicted error rate
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for contaminants
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0244P19
Clone
Clone name
hba-244p19
LE_HBa0244P19
P244P19
Clone type
BAC
Contamination
none
Estimated length
67,702
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found