Clone Read LE_HBa0245I04_SP6_380700

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0245I04_SP6_380700
Primer
SP6
ID from Seq. Facility
LE_HBa_245_I04-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
359 trimmed for vector and quality, 893 raw
Sequence
>LE_HBa0245I04_SP6_380700 (raw untrimmed)
CACATTGCTATTGAACAGAAAAAAATGTCTTTCACATAGCAAGCACATTCATGTCACTTCAAACCTAGTGTTGAACAACATCATAGCTTAAAAAAAGAAC
TTGATGTCTTATGCGAAACCCACTTCCAAAATAGAATAACAAACATCAATCCTACTTCAGACAAAAACAAAATGCCACTTGAAACACCCCCTCTTCCTCA
AAAGCACAAGTAAAATTCAGAAAAAAAGTTGTTAACCCTAACCTGCCGCTGATGCTGTTGATGCAGCTGCTGCTGATCCAACCCCATATGAGAGGCAGAA
GAAGATGATGTTGGAGAAGCTGAGGCTGATGCCGCCGTGTTCCGCCCATGTCCACCACCGGCGCCGGCGACACCACCTTGCTGATCTTTTCCCCCAGATT
GCATGCACCCTATGAAAATTCAGCAAAAAATTCTATTTCCTCCAAAAATGTTGCCACTCACCTGAAATTTAATTGATTAATTCTCATAAACCCTTCTTCA
AGAAAATAAAGTAATGAAGCATTTATTTCCTGTGGAAACCCCTTGTAGATTCCAAAACACCTGGATTTCCCACTTATTCCTATCCCCATATGTTCAATTA
ACTACTCTAACTACTTTTTTAAAACCTTTTCATTAATTTTCTTATTATATTAATTTTAATTTTATCTATAATAATTATTATCTATTTATTACCTGAATGA
TCATACTTCTTATACTTTATTCTACTTTTAATCTCCCTTGATATCACTCCTAAGATTTTTATATGATCTATGTATTTTAGGCCTGTGTAACTATCGTCTC
ACTATTATTATATTAAAACTAATTCCTTTCCTTTAAATCTCTTATTATATACAAAATGTCCATAATACCCGAATTTATTCTCTTTTATTAATG
>LE_HBa0245I04_SP6_380700 (trimmed for quality and cloning vector)
AATGTCTTTCACATAGCAAGCACATTCATGTCACTTCAAACCTAGTGTTGAACAACATCATAGCTTAAAAAAAGAACTTGATGTCTTATGCGAAACCCAC
TTCCAAAATAGAATAACAAACATCAATCCTACTTCAGACAAAAACAAAATGCCACTTGAAACACCCCCTCTTCCTCAAAAGCACAAGTAAAATTCAGAAA
AAAAGTTGTTAACCCTAACCTGCCGCTGATGCTGTTGATGCAGCTGCTGCTGATCCAACCCCATATGAGAGGCAGAAGAAGATGATGTTGGAGAAGCTGA
GGCTGATGCCGCCGTGTTCCGCCCATGTCCACCACCGGCGCCGGCGACACCACCTTGCT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.94165
Expected error %
1.10738
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0245I04
Clone
Clone name
hba-245i4
LE_HBa0245I04
P245I04
Clone type
BAC
Contamination
none
Estimated length
84,799
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found