Clone Read LE_HBa0245K12_T7_380936

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0245K12_T7_380936
Primer
T7
ID from Seq. Facility
LE_HBa_245_K12-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
600 trimmed for vector and quality, 892 raw
Sequence
>LE_HBa0245K12_T7_380936 (raw untrimmed)
NTACTGTCGGGGATCTCTGAGTGACCTGCAGGCATGCAAGCTTACCATTCCCTTTTTGAAACTCCATTAAGGAANGAATTGNCTTNNATGTTNGAAGTTN
TGAACCCTTTAGAAGGCGTNATTTTANGGATTTAATATGTGAATTGTGATTGCACGTGAGTNTATATTCTTATAAGTTACCGCTTAATGGTATTTGTTCA
AAGTTCTTGATTAGTGATTTACCATTTTTTTTAATGACATACAGCTTCTAGTTGCTCTTGTAAGTTCCTACCGTTATGAAGGTCCACGAGTAAACGATGA
TCTTGCAAAATCTGAGGCTAAGATTTTTGTAAATGCAATAAAAAATGCCAACAAGAAGAAGCTGATTGATGAGGATGAAGAGATTGTGAGGATCCTTTCG
ACAAGATTCAAGCTCCATCTTAAGGCCATCTATAGCCATTACAAGGAAATCACTGGCAACTTCTTGGACGAGGTAAGAAAAAAGAGAGTTTAATTTCTAT
GCACCGACACTTTTAAAATATAGTCTCAACTTTTTTTGTTTTCTTCAGGATCTTGAGTGTGACTTGACCTTGAAACAAGTTGTTCAATGCCTTTGTATAC
CTAAAGCATACTTTAGCAAGGTAAATAGCAAACACAAAACTGATAGATAATGCATCATACTGTATTTCTCCCTTTTTTGTTTGAACTAATTTGGTTATCT
ATTTGATTTGTTTTTTCAATCTCTTATTGCATAGATTTTGATCGCGTCCCTAAGATTGGATGTGGATGAATCTGCTAAAGACTCAGTTTACCGAGTCATA
GTGTCAAGAGCAGAAAATGAAGATATGCATCAAATTAAAGAAGATTTTTAGAACAAATATGGAATTCTTTTGGCTGAAAAAATTGGAAAAGT
>LE_HBa0245K12_T7_380936 (trimmed for quality and cloning vector)
GGATTTAATATGTGAATTGTGATTGCACGTGAGTNTATATTCTTATAAGTTACCGCTTAATGGTATTTGTTCAAAGTTCTTGATTAGTGATTTACCATTT
TTTTTAATGACATACAGCTTCTAGTTGCTCTTGTAAGTTCCTACCGTTATGAAGGTCCACGAGTAAACGATGATCTTGCAAAATCTGAGGCTAAGATTTT
TGTAAATGCAATAAAAAATGCCAACAAGAAGAAGCTGATTGATGAGGATGAAGAGATTGTGAGGATCCTTTCGACAAGATTCAAGCTCCATCTTAAGGCC
ATCTATAGCCATTACAAGGAAATCACTGGCAACTTCTTGGACGAGGTAAGAAAAAAGAGAGTTTAATTTCTATGCACCGACACTTTTAAAATATAGTCTC
AACTTTTTTTGTTTTCTTCAGGATCTTGAGTGTGACTTGACCTTGAAACAAGTTGTTCAATGCCTTTGTATACCTAAAGCATACTTTAGCAAGGTAAATA
GCAAACACAAAACTGATAGATAATGCATCATACTGTATTTCTCCCTTTTTTGTTTGAACTAATTTGGTTATCTATTTGATTTGTTTTTTCAATCTCTTAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.944332
Expected error %
0.709227
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0245K12
Clone
Clone name
hba-245k12
LE_HBa0245K12
P245K12
Clone type
BAC
Contamination
none
Estimated length
34,476
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found