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Clone Read LE_HBa0204D01_SP6_382741

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0204D01_SP6_382741
Primer
SP6
ID from Seq. Facility
LE_HBa_204_D01-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1048 raw
Sequence
>LE_HBa0204D01_SP6_382741 (raw untrimmed)
ACGCTACTTACTAAAATTCGTCCTGATTTTACACTTGACTTCCCCTTTCTTGGATGATTAAAAGCTATTGGTGTTATTTGTTGCCCTATTTTGATGAAAA
TCTACGTTGGATTTCTAGAAATTTTACTAATAGAAGAGAGATGTATAGGAGTATGAGATAAACACAACAAACACGAATACAGCTGATCATAAACAAATAC
ATTTTAACATTATTAAGATACACTTATATTAGTGCTCATATTAAAGGAGATGAAAATAGCCCTCAGGAATCACAAAACGTTTATAACATGGACTCGATTA
GCAATTAGCCACACAAGTAGAGGGTAAGAAAATTATGACACATGTAATGACATCAATGAAACACAAGTATGCTTGTCATGACTTACTCTCATGTTACAGA
ATTCGTAAAATACGGTACATATAATGAGATTAGAAAGGGAAAAATCAAATCGTATACAAATTTCTGCCAAACTAAAACTTATCACTAAACAAACTCCATA
AAATCCTTCATATAATTCGTCCTACCCTTTTTCTCAATAATCTAACATTCACATTATTTAATAATCTTTTTTATCCATACTTCTTTATAATATGTACTCT
CTCTAATTCTCACCATCCTTCAATCTATCAAAATCACATCTATCAATTAACTCCTCTAACATAACTACTCGTAACGTATTCAAATCCCTATCATCCTCGA
TACCCAACAGCTCTGTACCCTAACCCAATACATACATACTCTGCTACTCCTCTGAACTTACTTTTCTGTCCACCATTCATTGCCACTAGTCTTGTCACAC
ATTTTATCATAACCATATAATTCTTGCTCCCTTCATCCCAAAATCAATCCATATTTCTTCTCATTTTCTTCTCTATCATACACATACACTAAGTACAGCT
TCACACCATACAATCTTCTTAAAATCCTATCATAAATCACTCTATCTACCCACTAATATTTTTCCCAATTTCTCTTTCTCATACCCCACTCTTTCCACCT
ATTTACTCATATACATCTTTCAACAACAAATTCTTCTCCAACTCACAC
>LE_HBa0204D01_SP6_382741 (trimmed for quality and cloning vector)
TAT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for contaminants
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.31724
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0204D01
Clone
Clone name
hba-204d1
LE_HBa0204D01
C02HBa0204D01
P204D01
Clone type
BAC
Contamination
none
Estimated length
139,206
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found