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Clone Read LE_HBa0232O16_SP6_383868

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0232O16_SP6_383868
Primer
SP6
ID from Seq. Facility
LE_HBa_232_O16-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
431 trimmed for vector and quality, 989 raw
Sequence
>LE_HBa0232O16_SP6_383868 (raw untrimmed)
NNNGGTATCTCTCTAATTTCCATAAATTCTCGATGCTCCTCATGTCCCCCCTTACTTTTAGAGTATATCAGTATGTCATCCATAAATAGGATCACAAAGA
GATCCAAATATGGCTTAAAAATCCCGGTCATCAAACTCCTGAACACAGCATGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATA
CCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGGATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGT
AACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCCACTGACGGCATTCTATGCACATCCGAAAACTCCCAT
CCTTCCTCTCCACGAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACTACTCTTGAAGTTGTGCTTTTAACTCTCT
TAACTCCGCGGGAGCCATTCTATAAGGGGGCATAGAAATGGGGCGAGTACCCGGTTCAAGATCACTACAGAAATCAATATCCCTATCTGGTGCCATACCA
AGAAGGTCTGCAGGGAACACATCCAGAAACTCACGGACCGCCGAAACCGACTCAATCTAATGTACTTGGGTAGTGACATCCTTGAGATGTGCCAAGAAAG
CCTAAACACCTTTACGAACCATTTTCTTAGCACGAAAAAAGGAGATGAAACGCTCCCGAATGGAAATGTTATCACCCTCCCACACTAACGGATATGGTCC
CAGGCTTGACCTACCATCACCGTTTTAAACTTTCCCATCCTAAATTGCCAAATTGCGGGAAAAAAGCCAAATTCTCTCCCCAGAAATTAAAATCCAAAGC
CCCTCCCATTTGCGAAAAAAACCCAAAACTCACCATAAGGGGGTTCCCCCCCCCCCAAAAAGTTCCCCCAAAAAAGAACACTTTTTTTA
>LE_HBa0232O16_SP6_383868 (trimmed for quality and cloning vector)
TCACAAAGAGATCCAAATATGGCTTAAAAATCCCGGTCATCAAACTCCTGAACACAGCATGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTA
ATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGGATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAA
GCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCCACTGACGGCATTCTATGCACATCCGAA
AACTCCCATCCTTCCTCTCCACGAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACTACTCTTGAAGTTGTGCTTT
TAACTCTCTTAACTCCGCGGGAGCCATTCTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.979851
Expected error %
1.71604
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0232O16
Clone
Clone name
hba-232o16
LE_HBa0232O16
P232O16
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found