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Clone Read LE_HBa0220L05_SP6_385050

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0220L05_SP6_385050
Primer
SP6
ID from Seq. Facility
LE_HBa_220_L05-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
554 trimmed for vector and quality, 977 raw
Sequence
>LE_HBa0220L05_SP6_385050 (raw untrimmed)
TTTCCGGCGATAACNAGCGGTCCGGTCCAGATTCCCGGGATATTGACTTTAAAGTTTAAACTTTAATGTCCTTAAAGGGAAGATTGAAATTATATTTTAT
ATTAATGATCCCTAAAGAGGGAAATATTAAAATAATTAACAATTAAATTTGTAAAATGACTTGAATTAAATAGAAGAGACTATTTCCAAAGAAAATCAAG
GCGAATAGCCGTATATTTATTCAAATAATTAAATTGTACAATACAAATATTAGAAATAGATAAAGAGTACATAATGTAGGTATTTAATATTAATTATTGT
ACTAATAATTGCATTTCTTTTTAAGTCTTTTCGTAAATTTTGTATCATTTCAAAAGAAAGATTTTTTGGAGTTTCTATTTGTCTTTTATTGCTTCCATGC
CATCATCACTTTTCTCACCAAAGATTTCATCCATTTGGTCTTCTATTTGGCTACTTAATAGTGGTAGTCCGGTATTTATTCTTTCTACATTGACCCAATC
TCCAAACAATTGCGATATTTCCAAACTATCCTTTGCTAATGAATATCGATGATCTTCAATCATAAACCTCGCGGCACGAAATACTTGCTCCAAAGCGACA
GATGATGCTTGAATCGCTAGTACATCTCGAAGAATCCTAGCAAGGGTCGAAAATTAATTTTTACTATTCTTCCACCATAAAAATATTGGAGGTTGAAGTT
GTCCTTCTTCATGCCTAATTTTTTCCCGTGTCTTATTGAAATATAAATCAAAATAGGTCTTTATTAAAAGATTTAACCTCAAGAAGATCCATCCAATCAT
TCGGAATCATACTTTAAGCCTTACAACATGGGAGGTTCAACTATTTCGAAGTAAAAATTTCAATAACCTTTATATGCCATAAGAAAAAATCCCCGGACTC
CTGGGAAAAATGCCTACCTTTTACCATTCTTTAAACCCTACGAAGTTTCATCCATATTTTAAGTCCAAAAATTTGCC
>LE_HBa0220L05_SP6_385050 (trimmed for quality and cloning vector)
ATATTAAAATAATTAACAATTAAATTTGTAAAATGACTTGAATTAAATAGAAGAGACTATTTCCAAAGAAAATCAAGGCGAATAGCCGTATATTTATTCA
AATAATTAAATTGTACAATACAAATATTAGAAATAGATAAAGAGTACATAATGTAGGTATTTAATATTAATTATTGTACTAATAATTGCATTTCTTTTTA
AGTCTTTTCGTAAATTTTGTATCATTTCAAAAGAAAGATTTTTTGGAGTTTCTATTTGTCTTTTATTGCTTCCATGCCATCATCACTTTTCTCACCAAAG
ATTTCATCCATTTGGTCTTCTATTTGGCTACTTAATAGTGGTAGTCCGGTATTTATTCTTTCTACATTGACCCAATCTCCAAACAATTGCGATATTTCCA
AACTATCCTTTGCTAATGAATATCGATGATCTTCAATCATAAACCTCGCGGCACGAAATACTTGCTCCAAAGCGACAGATGATGCTTGAATCGCTAGTAC
ATCTCGAAGAATCCTAGCAAGGGTCGAAAATTAATTTTTACTATTCTTCCACCA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.925629
Expected error %
0.557412
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0220L05
Clone
Clone name
hba-220l5
LE_HBa0220L05
P220L05
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found