Clone Read LE_HBa0226H09_SP6_386189

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0226H09_SP6_386189
Primer
SP6
ID from Seq. Facility
LE_HBa_226_H09-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
743 trimmed for vector and quality, 987 raw
Sequence
>LE_HBa0226H09_SP6_386189 (raw untrimmed)
GTCNNNGGATATGCATTCTTACATTTATCAGTTTCATCCTCTTTGCTTAACTTCTCCTTTGGATTCATTGGTGTGCTTGTTGCCTTGCAATTTCCCATAT
GGAATTTCTTGAGTATCTCCCCCGGATAATTCTTTTAACATATAAAAATTTGATCACAGTATTGTTGATTTCCATTCCCAGAAAGTATGTCATTGTTCCA
AGGTCTGTCATCTCAAAGACTTGCACTCCTTAAACTCTTCAACCAGCCACACAATCTTTCCCGTCGCCAAGAGATCATCAACATAAAGGGAAACAATGAA
AAGATCAATTCATTTATGTTTGACATAAAGAGTAACATCAGATACACTTCCTACAGACCCCAAACTCAACAAGTGATCATCAATCCTGTTAGACCACACT
CTTGGAGCTTGTTTTAAGCTATAAAGAGTCTTTCTAACCAAACATACTTTTTCTTCTTTTACTTGCTCAATGAAACCGTCTGGCTGCTCTACATAAATTT
CTTCCTGCAGTACACCATTTAAAAAAGCATGTTTCACATCTAGCTGGAACACTTTCAAGCCCTTTTGTGCTACTATTACTAGCAACAGTCTAATAGTATT
AAATCGGGCTACTGGAGCAAGGTTTTTGAGTAATCAACACCAAATATTTGGGCATAATTCTTGAAAACAAGCCTAGCCTTGTATTTATTGATAGAACTAT
CAAAACTAAGCTTGGTTCTAAACACTCATTTTAGTCCAATGACCATCCTATCTTTCGGTATGTCAAATAACTCCCTAGTATCGTTTTTCTTGTTCATTAG
CATCCCATGCTCCATAGCGTTTCTCCATTGTTTATCTTGAAAGCGCTTCCTCATGCCCCGTAGGCTCACAAATTGCCACATTACTTTGTTGCTAGGAAAA
AAAGAGTAGTCTTGTACCTCTAATCGGAAGATCATCCCCTACTCATTTTGCCATTGATCGGAAGCTTGCCTCTCTAAACTTTTACTG
>LE_HBa0226H09_SP6_386189 (trimmed for quality and cloning vector)
AGTTTCATCCTCTTTGCTTAACTTCTCCTTTGGATTCATTGGTGTGCTTGTTGCCTTGCAATTTCCCATATGGAATTTCTTGAGTATCTCCCCCGGATAA
TTCTTTTAACATATAAAAATTTGATCACAGTATTGTTGATTTCCATTCCCAGAAAGTATGTCATTGTTCCAAGGTCTGTCATCTCAAAGACTTGCACTCC
TTAAACTCTTCAACCAGCCACACAATCTTTCCCGTCGCCAAGAGATCATCAACATAAAGGGAAACAATGAAAAGATCAATTCATTTATGTTTGACATAAA
GAGTAACATCAGATACACTTCCTACAGACCCCAAACTCAACAAGTGATCATCAATCCTGTTAGACCACACTCTTGGAGCTTGTTTTAAGCTATAAAGAGT
CTTTCTAACCAAACATACTTTTTCTTCTTTTACTTGCTCAATGAAACCGTCTGGCTGCTCTACATAAATTTCTTCCTGCAGTACACCATTTAAAAAAGCA
TGTTTCACATCTAGCTGGAACACTTTCAAGCCCTTTTGTGCTACTATTACTAGCAACAGTCTAATAGTATTAAATCGGGCTACTGGAGCAAGGTTTTTGA
GTAATCAACACCAAATATTTGGGCATAATTCTTGAAAACAAGCCTAGCCTTGTATTTATTGATAGAACTATCAAAACTAAGCTTGGTTCTAAACACTCAT
TTTAGTCCAATGACCATCCTATCTTTCGGTATGTCAAATAACT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.952771
Expected error %
0.0955629
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0226H09
Clone
Clone name
hba-226h9
LE_HBa0226H09
C04HBa0226H09
P226H09
Clone type
BAC
Contamination
none
Estimated length
140,458
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found