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Clone Read LE_HBa0210K12_SP6_386842

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0210K12_SP6_386842
Primer
SP6
ID from Seq. Facility
LE_HBa_210_K12-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
744 trimmed for vector and quality, 933 raw
Sequence
>LE_HBa0210K12_SP6_386842 (raw untrimmed)
NNCCAGACGACGAGTTGACACATTATGGGAAGAGTACATCAGATCGATACGCGAATATGACCATACTTGTTTGATATTGGTTATAGCAAATGGTCAAGAG
CTTACTCTAATTGTAAGCGCACATGGACCATGACTTCAAACATCGCGGAGTCATTGAATAATGTTAACAGGTTAGCACGGAGGTTACCGGTGATTTCACT
TCTTGAGTTTACGAGGGTAACAATTCAGAGGTGGATTCACAAGCATAATGAGGAGGCTGATAAGACAATATCTGATATGACAAAAAATATGATATTTATC
TACAGAAAAGTATTGCGTTGTCGTACAATATGAGGGTATGTGTTTCACTGTAATGTATTTTTACTTCTCAATAATCTGCAGCATGTATAATTTTTTTTTA
CATAGGTGATACCTTCAACTGTTGATCTGCATACTGTAGCTGAAGGAGCAAAGAAATTCATAGTAAATTTGAACACAAGGAGGTGTAGTTGCGGAAGATT
TCAACATTATGTGGTCATGCAATTGCTGTTCTCCGGTACAGGAAGTTACATGAAGCAGATTTCTGTTCTGCTTTTTATAGCCTCAAGAATTTCAAAGATG
CTTATGCCATTCCTGTCGAGCCTATCCCGTGCGAGAGTAAATGTGATATACCAAGTTATATTTCAGATCCTAAAATGATGCCGCCTGGTCCAAAAAGATC
AGCGGGAAGACCCAAATTTGAATGCTAAAAGGGGTTCGCAGATGTGAAATTCAAGAGGACAAAAAGCACATGCAGTAGATGCCATCAGGTTGGACACAAT
ATGAAGACATGTTCCAAATATTCCTATACAAAAATAATGATTTCGTAATGTAACATTTGGTGTTTTTGAGTGTTTACATTGTTATAACCTGTTTTTTTAT
TGAAACCATATTACTTTTCATCACAATGTCCTA
>LE_HBa0210K12_SP6_386842 (trimmed for quality and cloning vector)
TCAGATCGATACGCGAATATGACCATACTTGTTTGATATTGGTTATAGCAAATGGTCAAGAGCTTACTCTAATTGTAAGCGCACATGGACCATGACTTCA
AACATCGCGGAGTCATTGAATAATGTTAACAGGTTAGCACGGAGGTTACCGGTGATTTCACTTCTTGAGTTTACGAGGGTAACAATTCAGAGGTGGATTC
ACAAGCATAATGAGGAGGCTGATAAGACAATATCTGATATGACAAAAAATATGATATTTATCTACAGAAAAGTATTGCGTTGTCGTACAATATGAGGGTA
TGTGTTTCACTGTAATGTATTTTTACTTCTCAATAATCTGCAGCATGTATAATTTTTTTTTACATAGGTGATACCTTCAACTGTTGATCTGCATACTGTA
GCTGAAGGAGCAAAGAAATTCATAGTAAATTTGAACACAAGGAGGTGTAGTTGCGGAAGATTTCAACATTATGTGGTCATGCAATTGCTGTTCTCCGGTA
CAGGAAGTTACATGAAGCAGATTTCTGTTCTGCTTTTTATAGCCTCAAGAATTTCAAAGATGCTTATGCCATTCCTGTCGAGCCTATCCCGTGCGAGAGT
AAATGTGATATACCAAGTTATATTTCAGATCCTAAAATGATGCCGCCTGGTCCAAAAAGATCAGCGGGAAGACCCAAATTTGAATGCTAAAAGGGGTTCG
CAGATGTGAAATTCAAGAGGACAAAAAGCACATGCAGTAGATGC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.969494
Expected error %
0.19304
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0210K12
Clone
Clone name
hba-210k12
LE_HBa0210K12
C08HBa0210K12
P210K12
Clone type
BAC
Contamination
none
Estimated length
89,237
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found