Clone Read LE_HBa0115B09_SP6_38848

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0115B09_SP6_38848
Primer
SP6
ID from Seq. Facility
LE_HBa_115_B09-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
481 trimmed for vector and quality, 864 raw
Genbank Accession
Sequence
>LE_HBa0115B09_SP6_38848 (raw untrimmed)
AACCCGTTACTGAGTGGTAGATACTCGTAATTACAATAAAACACATTCCTATTAATTAAACTTAAAAATTCAATGTAAAGGCATATAAATTCAAAATTTC
CAGGTTTCATTTAAAGCAGATAACAATGGCGTACCTTAAGAGCAAGCTGTCTAAACGCCTTCCTAACTTCAGATTCAGATGCACCGGGTTGAATCTTCAA
GGTCTTATACGGATCGGCAACAGCAGAAGATGAACAAACACATGAAACCCTAAATCCATTTTTACCGTTTCTAGTCTTCTTCTTCGCTGAGTTCCTCAAT
CGAAACAGAGACGCTGAAGCTGCTCCATAACCCCCAATACTTCCCGTCATTCCCATCGTAGCCATTGCACACAAATTTCAATGAAAATCGAAAATGATTA
AATTATTCACAAATTCAAAAAGAGAATGAGATTGTTTTAATGGTTAAAAAAAAAAGGAATATAATGAAAAGGGAAATGGGTGTTTGCAGTATATATAAGC
AGAAAAAGGTATGGTAATTAATTTTTTTTTGAGGTGATAATAATGGTGTGGATAATGACGTCACTTATCCATTTTCTTTATCCGTACTCCACATCCATAT
ATCCTTGACTGGTCTGCACCGGTTTCCTGTTTTTGTAAGCAAATTGGTTCAACAACCGATGTTTCTTTTTTCTGTTTGTTCTAAATTTTTTTGTTGCTAT
ATATGTTTTGTCAAGTCATGTCGTCCCCAGCCCTCCTCCTCCGGCCCCTCATGGTCTTGTTTGCTCGTCCTGGAGAGTCGCTTCTGATTCTGGCCTCTTT
CACGGCTATCTCTACTGCTCTACTACTGCACCCATCCCTTGCTTTCCCATTTCTGCGATCTTCT
>LE_HBa0115B09_SP6_38848 (trimmed for quality and cloning vector)
TATTAATTAAACTTAAAAATTCAATGTAAAGGCATATAAATTCAAAATTTCCAGGTTTCATTTAAAGCAGATAACAATGGCGTACCTTAAGAGCAAGCTG
TCTAAACGCCTTCCTAACTTCAGATTCAGATGCACCGGGTTGAATCTTCAAGGTCTTATACGGATCGGCAACAGCAGAAGATGAACAAACACATGAAACC
CTAAATCCATTTTTACCGTTTCTAGTCTTCTTCTTCGCTGAGTTCCTCAATCGAAACAGAGACGCTGAAGCTGCTCCATAACCCCCAATACTTCCCGTCA
TTCCCATCGTAGCCATTGCACACAAATTTCAATGAAAATCGAAAATGATTAAATTATTCACAAATTCAAAAAGAGAATGAGATTGTTTTAATGGTTAAAA
AAAAAAGGAATATAATGAAAAGGGAAATGGGTGTTTGCAGTATATATAAGCAGAAAAAGGTATGGTAATTAATTTTTTTTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.936221
Expected error %
0.445244
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0115B09
Clone
Clone name
hba-115b9
LE_HBa0115B09
C03HBa0115B09
P115B09
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found