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Clone Read LE_HBa0233A10_T7_390045

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0233A10_T7_390045
Primer
T7
ID from Seq. Facility
LE_HBa_233_A10-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1569 raw
Sequence
>LE_HBa0233A10_T7_390045 (raw untrimmed)
TCACTCCCGACTCTCTGTCGAGAGTCAACGGCCCAAAGAACTTACTCATAGTTTCGTTAAGACGATATTCTCACCTCGTCTTGTTTATCTACTGCATGAN
GATGAATGTCCCATCTAGTCAGTATAGCGCTGCANTTCAATATTGTGTTTGAGCCACCTCCTAACCATATACATCTCCTAGACTACATTACTATCTCTCT
ACTAATGTGCCTGCTAATGCACCTGAGTCNCTTCGCGTCACACTCGCATGTCNTTAGACTAATGCAGAGTCGCGTACTATCTATATTCAGCAGGCATGNT
TGCCTCATCTATACTGATATCTGTAGACTGTAGGCTGCGCATCTATATCTGTGTACACATTCGTTCGCTTATGACTGGAACTGATAGCATCTGTTCTGCT
AACCACGCACCACTTAACTCGTTCTTCTACTATATAGTGCCTCTATAAGAGACCTTACTCTATAGCCCCTCTGATTTGCACCTCCGCTCTAGAAGATATG
TATCCCTTCCATATATCAGCACCAAGTACACATCTCGCTACTCACGCATTCTTGTCTCCGCGTCCCATCATGAGTACATTAGAGTACTCTTCTACTGATA
GATCTAATACATGCTACTATTTGCCACTAACTCTCTTAACATAGAGACGTATACATCTCTCTGTACATTGATGCTANATCCCTAGCCGATATGCATAACC
TTCGTTAAATCCTGATCGAGAACTCTCCTTGGCCTACCACATCACTACTCATAAAGTCTCCACTTCCGGCATTTGCACTACCCCTCTCTTCTATATATAC
CAGCATGTACGCATACTCCCATCTCCTCAGCATGCACTGCCAAATGCTACATCTCCTATCTCTTTTCTCCTCCCGAAACCCAAAGCATTGGATAATGCCT
TCTATCGCTCTTGATTCCCTTACATAATCATCTGAAAAGAATGCATACTCTACTCCTACTCCTCTTGTGCTGCTTCCATAAATGAATTGAGCAATACTGG
TAGTCTCTGGCATCCTTTCCTCTATATCCTAACTGCTTGTCCTCATCACAACTCTCTATACTACTCTCCAACCGCTGATCACCCTTATCATCCACTTTGA
ACTCCTGACTCGCTGTCGTGATCCCCTAACTCTCCCTCACCATGCTCACGTATTCATTCCTATCTCTTATGACGTAGTACTCTGATATCACAAGATCGTG
ACTCCTTCTCCTCCTTTGTTCATCCACACTCTTACTCTCGCATAATACCACCTCCTTCTTTAACTTTCTGCTATCTACATTGTATCTATTCTGATAATCA
ACAATATCTCTTGCTACTCATGACTAATATCTCTCACCACATATCACGCGTATGACTCAATTCCGATACTACCATCACTACTAACTATCTTCATCATCTC
TACTCATCACTCCTCCTGTCATACTCTCATCAGACTCATCACCCTCCATCGCTCACCTCTATCCACTCATTCTCCACATACGATACGAGCTACTNTCTAC
ATCTTTCTTATCTATCGTACCTCATCTCATGATATTCCACTACTCTCACCTATCGCGGCGTATAAGTAN
>LE_HBa0233A10_T7_390045 (trimmed for quality and cloning vector)
CCT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
  • Not screened for contaminants
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.58364
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0233A10
Clone
Clone name
hba-233a10
LE_HBa0233A10
P233A10
Clone type
BAC
Contamination
none
Estimated length
92,934
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found