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Clone Read LE_HBa0233D20_SP6_390370

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0233D20_SP6_390370
Primer
SP6
ID from Seq. Facility
LE_HBa_233_D20-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
650 trimmed for vector and quality, 949 raw
Sequence
>LE_HBa0233D20_SP6_390370 (raw untrimmed)
NNGGCTTCGTTTNNGAGCTGACCGATAGTCGACNTCGATTTGAGGAGAACACTGAGGTGGCGACATGGTAAAAAGACACTGTCTCCCATCCTAAATGTAT
TTTTTAAGCTAACGAGTTTTATCTCATTCTTTGTCGAGAGCATCAAAAAGGATGAATTCTCCAAAAACCACAGGTGCGGATGACATCAAAAAGGATGCAG
CACAACGTGGAACTCTTTCTTAGCAGCGAACTGGGACACAGACCAAAGAGGAATATCAAAATCTTATGACGCGAGCAGAGGAGCGAATTCCACCACAATC
AGACCACCCTCTCGAGGCATGTAGGTCTTTCTTTAGTTCTGTCAGTTTCAGTCTCGCGTCCGAAAGTTTCGATCTATCGAAAGCAAGTTTACAATCTGAG
TGACGATGCGCCAAGAGTTTTGGAAATTATGTCCGTGTAGGTTCTTAATTATGTGTATGAATTGCGCCACATTCATGGCTAAAGAGGTTACAAGCCTCCT
TTTCATACTCGTTAATTTGTCACTTGTCCAAAACCAAAGGTTATCTAGCATAATAGATTTCTTTTTACACCGATCGAGTAAAACTACACACTGCCTGATT
CCGAAGGTTTAAGGGTATGTAGGCAGATTCAATGTTGAAAACTCGACTATATTCCAACATTCGCCATCGAATGCTATTCTCGAGCATTTTGATACCTTCA
TAATTCGGTAACGAGGTGGCCTCTGAATTTTTTCAAAATCTGGCGATAAATCAAGCTTAGCCAACTACAAGTTAACTGAAATTCCTCATTATGCCCTGAA
ATTTTTTAGGAAAACCCGTTCCAAGGGTTTCAGCCATTAATTTTCTAAAACCCTTTTATTGGTTTCCTTCCTTTCAAAAATGAAATGGGGGTTTTGTCCA
AAATTGGGGTTTGGTCCAATTTTCATTTTTCCTCCCAAATTGCCTTGCA
>LE_HBa0233D20_SP6_390370 (trimmed for quality and cloning vector)
GATTTGAGGAGAACACTGAGGTGGCGACATGGTAAAAAGACACTGTCTCCCATCCTAAATGTATTTTTTAAGCTAACGAGTTTTATCTCATTCTTTGTCG
AGAGCATCAAAAAGGATGAATTCTCCAAAAACCACAGGTGCGGATGACATCAAAAAGGATGCAGCACAACGTGGAACTCTTTCTTAGCAGCGAACTGGGA
CACAGACCAAAGAGGAATATCAAAATCTTATGACGCGAGCAGAGGAGCGAATTCCACCACAATCAGACCACCCTCTCGAGGCATGTAGGTCTTTCTTTAG
TTCTGTCAGTTTCAGTCTCGCGTCCGAAAGTTTCGATCTATCGAAAGCAAGTTTACAATCTGAGTGACGATGCGCCAAGAGTTTTGGAAATTATGTCCGT
GTAGGTTCTTAATTATGTGTATGAATTGCGCCACATTCATGGCTAAAGAGGTTACAAGCCTCCTTTTCATACTCGTTAATTTGTCACTTGTCCAAAACCA
AAGGTTATCTAGCATAATAGATTTCTTTTTACACCGATCGAGTAAAACTACACACTGCCTGATTCCGAAGGTTTAAGGGTATGTAGGCAGATTCAATGTT
GAAAACTCGACTATATTCCAACATTCGCCATCGAATGCTATTCTCGAGCA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.972793
Expected error %
0.157526
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0233D20
Clone
Clone name
hba-233d20
LE_HBa0233D20
P233D20
Clone type
BAC
Contamination
none
Estimated length
138,902
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found