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Clone Read LE_HBa0115F17_SP6_39056

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0115F17_SP6_39056
Primer
SP6
ID from Seq. Facility
LE_HBa_115_F17-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 1187 raw
Sequence
>LE_HBa0115F17_SP6_39056 (raw untrimmed)
TGGTGTCAATGATAGTATCGAAGTGTATTNTAGAGGTGGTAGATCCTACGTCTCACAGACAAANACACGCAGCACGGCGCGTCTCAGAAAAGCACGGAAC
NACTGCGTGTGGAAGAGCTGACGGTAAGTCGCAGACGAAGCCNACGATGAAGAGGAGGANACGCATCAACACTAGTACACTGCATCGATGTGTGATGTCT
GATGTTGGGTATTTGATATCGGATTAATCAAGCGAGCTCGCGCAATGTNTCTGTGCTGAGATCTCGGATCATTATACATTATATGTGCGCGTCGTGATCA
TGTGNTGAACGACGATGNCNCTACGTCTACACGCNCGNGGATGGACGGCGAGACGGACGTGTTACGTGATGATCGGCGCTGGAGTCGATCGGCGGGGTTG
AAGTCGGATCATCTACCTGACATGGGCGCTANATGACGTCTGGANCTGACAGATGCTGCANGTCGCGTTGTGTTGTTTGCAANGATGTCCTCGTGCGTTG
CATGCGGTGGCCNTGGGCTNATGGACGCAGCACACTCNGATACAACAATACAAACACGATCTNACCATTGAATCTCGATACAGAATATGAATGGCTGTAG
ATCAATCAATATGATGTTGCGACTCGACNTGCTTAGAGAGTGTAGAGCCTCGGACGCTGATGCCATATCGCGNCTGCTCTGGTGCTAACANCANGCAGTC
TGCGGACGGTAACTCTGGAAGATAAGNTGTACAGTATCACGACACCTGANGCNTGATATTTGCCCTTGAATATCGCCGCTCTGTTTGCTACATATGCGAT
TACTTCCTCGCCTTGTCTNGTCCTGGTGCTTCGGTTATTGTCTCTTGTACTCGCTNTAGTTGACGTACGGGTGCGCTGATGCGCGACTCTGTGTCTCTCG
TCTCATGACGTCCGAGAGGACGTGCTGAGGTTGAACCAGAGATTGCTTCATGTACGTGTACTCCTCGTCTAGCTTGTCGTAATATATCCTGATGGTCAGT
AGACCGCGATTGATGGTATGGCCGCGAGTGAATGAGATATGGCATCANGAGCGTACACGACGGGGGCAGTATGACCCGCGCCTAGTACTCGCGAGCTGCT
TCGTATTCCGTCACGTCTCCTGCGGCTCGCAACTTCACACTCTNCANCCTGATATGTTCATCCGCAAGATACTACGATACTACGCTG
>LE_HBa0115F17_SP6_39056 (trimmed for quality and cloning vector)
AGCT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.05073
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0115F17
Clone
Clone name
hba-115f17
LE_HBa0115F17
P115F17
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found