Clone Read LE_HBa0216G16_SP6_390883

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0216G16_SP6_390883
Primer
SP6
ID from Seq. Facility
LE_HBa_216_G16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
681 trimmed for vector and quality, 1012 raw
Sequence
>LE_HBa0216G16_SP6_390883 (raw untrimmed)
CGTACTAACCTCTTTGAANAATGATGCCTTGGTATAAAGAAGGTTTGATGAACTAAAAGAACGATTTTAGGGGATCGGGTGTCACGAACCGACACGTAGT
AATATTGGATTGGGTGTCACGAACCGACACGCAGTATTAATGGATCGGGTGTCACGAACCGACACGTAGTATTAGGGGATCGGGTGTCACAAACCGACAC
GTAGTATTAATGGATCGGGTGTCACGAACCGACACGTAGTATTAGGGGATTGGAGTGTCACGTTCCAACACCAGGATAGTAAAAAGAATGAATTTGAATT
ATGTTACTGTACTCAATTTAATGAACCTGTTTCCCAAATGGGTATGGTGTGGAGGCTTGAGTCCTCATGGATGTGCTTGGGTTGTGCCCAATGGCCATGG
TACTTGTTGTTGACACCTGTTAAGTGTTATGTTTGATTTTATGTTATTATTCGATATATATTGTTTTCTATTTTGAGTTGGCCGATGATATCTACTCAGT
ACTCGTGTTTTGTACTGACCCCTACTTGTATGTTTTCTTTTTGTTAATTGTGGAGTGCAGCAAACGTAGCGTCGTCTTCAACTCAACCGCAACTCTAGCC
AGTCTTCGTCACGTCAGATTTCAGGGTGAGCTATTGTTTCTAGCTTGGACTGGGTCTTGTTCTTCACGTCTTGATGCCTTGAAGTTCTGGCATGGACTAT
CTGTTTAGTTATTTTAACTTCTTAGATACTCTAAGACTTAGTAATTTGAGGAAAGATGTTCTTGTGATGGTGACTTCCGAATTTTGGGGAAAGTAATTTA
AAAATTTTTAAAAGTTAGTTATTTGGTTTATATAAAGAAGTTTAAAATCTTCCGCCATTATTTTCCGGTTATTATGAATGAAATGTGTTGGGTTTTAAAT
CAAATTGGTTCCCTCACGATGGGAGGTTAAATGTGGGGGGCCAACTCTGGATTTATTTTTGGGCTCTGACTCATAAAATGAAAAATGTAGGTCCTACCTG
CTCACATAATTG
>LE_HBa0216G16_SP6_390883 (trimmed for quality and cloning vector)
ATGATGCCTTGGTATAAAGAAGGTTTGATGAACTAAAAGAACGATTTTAGGGGATCGGGTGTCACGAACCGACACGTAGTAATATTGGATTGGGTGTCAC
GAACCGACACGCAGTATTAATGGATCGGGTGTCACGAACCGACACGTAGTATTAGGGGATCGGGTGTCACAAACCGACACGTAGTATTAATGGATCGGGT
GTCACGAACCGACACGTAGTATTAGGGGATTGGAGTGTCACGTTCCAACACCAGGATAGTAAAAAGAATGAATTTGAATTATGTTACTGTACTCAATTTA
ATGAACCTGTTTCCCAAATGGGTATGGTGTGGAGGCTTGAGTCCTCATGGATGTGCTTGGGTTGTGCCCAATGGCCATGGTACTTGTTGTTGACACCTGT
TAAGTGTTATGTTTGATTTTATGTTATTATTCGATATATATTGTTTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACTCGTGTTTTGTACTGACC
CCTACTTGTATGTTTTCTTTTTGTTAATTGTGGAGTGCAGCAAACGTAGCGTCGTCTTCAACTCAACCGCAACTCTAGCCAGTCTTCGTCACGTCAGATT
TCAGGGTGAGCTATTGTTTCTAGCTTGGACTGGGTCTTGTTCTTCACGTCTTGATGCCTTGAAGTTCTGGCATGGACTATC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.973958
Expected error %
0.311758
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0216G16
Clone
Clone name
hba-216g16
LE_HBa0216G16
C01HBa0216G16
P216G16
Clone type
BAC
Contamination
none
Estimated length
136,993
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found