Clone Read LE_HBa0233N15_SP6_391327

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0233N15_SP6_391327
Primer
SP6
ID from Seq. Facility
LE_HBa_233_N15-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
732 trimmed for vector and quality, 986 raw
Sequence
>LE_HBa0233N15_SP6_391327 (raw untrimmed)
NNNGGAGAGTGCATNAATCTAGGTCTCAAAGGTGAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTG
TTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTTCAGATTCAAAGGTAGAGTTGAAGGAAGTTATATG
GGGTATCATGGCTGAGGTAGGGAAGCCTAATTTAGTAGATTTTTTCCCCATACTTGAAAAAATTGATCTTCAAGGAATAAGACGTCGCGCTATCATTCAT
TTTGGTAAGTTGTTTAAACTTTTTGATGATTTGATCAACGAACGATTGGAGGAAAAGAAAAGACCAGGATTCATGGAAAAGAGCGATGTTCTTGAAATAT
TTCTCAATATTACTGAAAAAAATCCTCAAGAGATTGATCATAATCACATCAAGTCCATGTTCATGGTTCGTATTATTTATCATGAGCTTATGTTATATTA
TTATAATTTATGAATTTTTTTTATTATTATTGCAATATATGGTTATTTATTTTGATGTACAAATTAATGTTATAGGACCTATTTGGTGCGGGTACTGATA
CAACCACAAGCACATTGGAATGGGCAATGGCAGAATTGCTTAAACAACCTGAGATAATAAAAAAAGCTCAAGTTGAACTTGCTGAAATCATTGGGAAAGG
AAAATTAATAGAAGAAGCTGATGTTTTTCGACTCCCTTACTTGCAATGCATTTATCAAGAAACATTAAGATTGCATCCACCGGTTCCGCTCTTAGTTCCG
CGCAAAGTAAACCAAGATGTTGGATTTGGTGACTACATCATCCCAAAGGGCTCACAGGTATGTATGTTGGTGTAAATAAAGTTTTTTGACGAAAATAATA
TGAAATAGGGTCCTAAAGAGGACCCCAAAGAAAAATTTTTAATTATTTTTTTAAAAAATTAAATTAATTAAAAATTTGGTTAAAGT
>LE_HBa0233N15_SP6_391327 (trimmed for quality and cloning vector)
TCTAGGTCTCAAAGGTGAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTT
AATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTTCAGATTCAAAGGTAGAGTTGAAGGAAGTTATATGGGGTATCATGGCTGAGG
TAGGGAAGCCTAATTTAGTAGATTTTTTCCCCATACTTGAAAAAATTGATCTTCAAGGAATAAGACGTCGCGCTATCATTCATTTTGGTAAGTTGTTTAA
ACTTTTTGATGATTTGATCAACGAACGATTGGAGGAAAAGAAAAGACCAGGATTCATGGAAAAGAGCGATGTTCTTGAAATATTTCTCAATATTACTGAA
AAAAATCCTCAAGAGATTGATCATAATCACATCAAGTCCATGTTCATGGTTCGTATTATTTATCATGAGCTTATGTTATATTATTATAATTTATGAATTT
TTTTTATTATTATTGCAATATATGGTTATTTATTTTGATGTACAAATTAATGTTATAGGACCTATTTGGTGCGGGTACTGATACAACCACAAGCACATTG
GAATGGGCAATGGCAGAATTGCTTAAACAACCTGAGATAATAAAAAAAGCTCAAGTTGAACTTGCTGAAATCATTGGGAAAGGAAAATTAATAGAAGAAG
CTGATGTTTTTCGACTCCCTTACTTGCAATGC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.938642
Expected error %
0.129876
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0233N15
Clone
Clone name
hba-233n15
LE_HBa0233N15
P233N15
Clone type
BAC
Contamination
none
Estimated length
102,018
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found