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Clone Read LE_HBa0216M11_SP6_391434

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0216M11_SP6_391434
Primer
SP6
ID from Seq. Facility
LE_HBa_216_M11-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
779 trimmed for vector and quality, 986 raw
Sequence
>LE_HBa0216M11_SP6_391434 (raw untrimmed)
CGTATGTCCTCTTCGAAGGTCATTCGGCTTCACTTGCTAATAGTTTTAAGATATTTATAAATACAAAATGAAGCAAAAAAGTTAATAGGGGGCTCAGACG
ACTTCTTTATGTTCTGTGAATTCAGGGATCCAACCGTTGATCACATTAACACATTATGACATACCACAAGAACTTGAGGAAAGATATGGTGGTTGGCTTA
GTTCACAAATACAGTAAGTAGCTGCTCCCATCTTACACTTTAAGGTAGTTTGTATATGATGAACAAGTTAACTTGTGTGGTGTTTCAGGGATGATTTCAG
CTATTATGCAGACATATGCTTCAAATATTTTGGGGACAGAGTCAAATACTGGACAACCATCAATGAGCCTAACCTTATGGCTGTTCGTGGCTATAGACTA
GGAACTTACCCTCCAAGTCGATGCTCCGGTATAGTTGGGAATTGTAGTGCTGGTGATTCAGAAAGGGAGCCCTTCATTGCAGCTCACAATATGATCCTAT
CTCATGCAGCTGCTGTCAGCACTTACCGTACCAGATATCAGGTTTGTTCGATGGATCTATGCCCTTTCACCATCGCCATGTCAACTGTCAACACAGCATG
ATCTTGCAGAATTAGTCCAAATGGATTACCCCTTTAGTGCAACGCTATCTTCTGGCTTGTAAATGATATGAAGGTGAATTTTGGGGGAGTCAAACAGGAA
AATGGTTTACATAAAAGACTAAAGCTCGAAAATTTAAGCTTGGAAAATACTTCCTCCTCTATCTATCAAATGGCATATTAAAAGTTTAGTAGAATATAAC
CTAGTCTATTTTATGCTTCTTTTCAGAAAAGACAAGGGAGAATGATTGGAATTTCTTTGGATACCCAATGGTATGAACCATTCAGCAATTCCCCAAAAGA
CATACCTGCAACTGAAAAAACTCCGTTCTTCTACGTCAACGGGTAACCCTTCCCTGGTCAATAATTCATACATCCCACCTGGTTTN
>LE_HBa0216M11_SP6_391434 (trimmed for quality and cloning vector)
ATTCGGCTTCACTTGCTAATAGTTTTAAGATATTTATAAATACAAAATGAAGCAAAAAAGTTAATAGGGGGCTCAGACGACTTCTTTATGTTCTGTGAAT
TCAGGGATCCAACCGTTGATCACATTAACACATTATGACATACCACAAGAACTTGAGGAAAGATATGGTGGTTGGCTTAGTTCACAAATACAGTAAGTAG
CTGCTCCCATCTTACACTTTAAGGTAGTTTGTATATGATGAACAAGTTAACTTGTGTGGTGTTTCAGGGATGATTTCAGCTATTATGCAGACATATGCTT
CAAATATTTTGGGGACAGAGTCAAATACTGGACAACCATCAATGAGCCTAACCTTATGGCTGTTCGTGGCTATAGACTAGGAACTTACCCTCCAAGTCGA
TGCTCCGGTATAGTTGGGAATTGTAGTGCTGGTGATTCAGAAAGGGAGCCCTTCATTGCAGCTCACAATATGATCCTATCTCATGCAGCTGCTGTCAGCA
CTTACCGTACCAGATATCAGGTTTGTTCGATGGATCTATGCCCTTTCACCATCGCCATGTCAACTGTCAACACAGCATGATCTTGCAGAATTAGTCCAAA
TGGATTACCCCTTTAGTGCAACGCTATCTTCTGGCTTGTAAATGATATGAAGGTGAATTTTGGGGGAGTCAAACAGGAAAATGGTTTACATAAAAGACTA
AAGCTCGAAAATTTAAGCTTGGAAAATACTTCCTCCTCTATCTATCAAATGGCATATTAAAAGTTTAGTAGAATATAAC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.968465
Expected error %
0.221374
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0216M11
Clone
Clone name
hba-216m11
LE_HBa0216M11
P216M11
Clone type
BAC
Contamination
none
Estimated length
128,893
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found