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Clone Read LE_HBa0234H01_T7_392264

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0234H01_T7_392264
Primer
T7
ID from Seq. Facility
LE_HBa_234_H01-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
6 trimmed for vector and quality, 951 raw
Sequence
>LE_HBa0234H01_T7_392264 (raw untrimmed)
CTCTAGACTCCACCTGGATGGATGCCAGCTTAGATCGGCAACTGAGCACATCCTGTTGTTACTGCTCCCCAACTCAATTTTCCTGACTTGGGATACAGAC
ACTCTCTCTGCGGTTTAATCTACCATACTTCGGGCCAAACCCGATCCCTTGAAGTGACGGGTCGTGTGAACAACACCCATCAACTGATACACCTCTACAT
CCTGATCCCCCAATACTGGCCACCCCACCTGCAAAGTGTCAACTTGCAAACTACTATCCGAAACAGGAATCAC
TTTCTGGAAATAACTACCCCTCTATGA
TAGGCGGACCTCTGTTTGTACCTTCGGATCACTGACGAACCCCGATTGTGACGAACTTATCGTATTCAACGTCATCTGCCCCTACCTCCAGCACGCTTAA
TACCTAATACGCAAATGGCACTGCCATATCATTCAATGACAAGGATGATACCTCAATCTTGAGTGCACCCTTTGACTCCCAACTCACACTCTAAACCTAT
ATCCTCTGGCATAATTGGCTGACCAACATCTGAGGCCCGACATGTACCCACAAGCTCAGACGAACTTGCGTGGATGAATGACTTGGGCTTGTGCACTTTA
ATACACCACATTGCTTGGTTTACTTTTAAGGTTCCACGATGATCGTGTGCAATTAAACTCATTCTTCTTCACCCACTAATAAGTTTACTAATACTGCAGT
TACGTCCACCATGCAATTAGCAATCCTCTACCATTTTATATTTTTTAAGAACCTTTTAAAATCCTGGTAATAAAATCGGGTGGGGGGAAACTCCACCTCC
CCCAAAGAAACAACCCTCTTAACCCAAGGCGGGTGTAATTCTCCCTTGGTGGGGTCACCTCGTTTAAAATCCCTTGTTTTCGACCCAACCCAGGAAAAGC
CCCCCCCTCCCTCGCGCAAAAATAAGGATAACCTCTAAAAACCTTCGGAAN
>LE_HBa0234H01_T7_392264 (trimmed for quality and cloning vector)
TTTCTG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for contaminants
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.0662
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0234H01
Clone
Clone name
hba-234h1
LE_HBa0234H01
C08HBa0234H01
P234H01
Clone type
BAC
Contamination
none
Estimated length
111,885
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found