Clone Read LE_HBa0235J18_SP6_394122

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0235J18_SP6_394122
Primer
SP6
ID from Seq. Facility
LE_HBa_235_J18-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
771 trimmed for vector and quality, 851 raw
Sequence
>LE_HBa0235J18_SP6_394122 (raw untrimmed)
TAATCTGATATGTTCATTTTCTTACTCAAACTCTTTTGGGAATCTTAGTTTCCTCTTATATTCATTTAAGGAAACATTTATAGACTCTTAGGGAACACGG
AGTCCTCATAGGACTTTTGAGAAATGAACGCAACTCCTTACTCTTTACTTAGCTTGAAACTTGAGTCTTAAATCAACTCTTTTGAAATACTCCTTGAATC
TTAAAATAAAGTTAGAAAGTTGTTAAAGACCCTTGAGAACTCTTAAGAACTTTACCTTAACTTGTTTCTTAACTTCTAGACTTGACTCTTAACTTCTTTG
ACTTTGATCTTAACATTCCTTGAATTGGATTATGGATTCAAGGTGCATGACCTCATGTTTATGGATGATCTCATAATGTTTAGATGTGCCTTAGAGTTTT
GGAATCAACTAAGAAACATGGGTACATTACTTAGGAACTTTTACGAAAAGATGGAGAAAGAATGGGGTGAACTGGCGTCCTTGGCACGCTGAGAGATGTG
GAGAACCAGGCCCCAAACTTCAGAAGCCAAGTTGGGGCGTTCTGGCTAGCGCAGCTCCCCAATATGGACAGAGATTATCCTGTGGGGATATAAGAGGCGC
AGTGACCCAAGGCCCTACAAACAGGCTTTCTCGACTTTTATTATCCATTTTTAAACTCCAAAGCCTCTTAACGTCCAAGGTTACCGAACACATTTGACTC
AAAAACAAACCTGGAAACACGAATCAAATCAACTCTAGGCATGCAACAATTTTCTTCAAGAACTTCACTTTTTATCATTCAACCCACTCATAATCGCTGA
ATTAAAAAAGTTGCTGTGTGAGTGAACTAACCAAAATGAAAAGATCTCATG
>LE_HBa0235J18_SP6_394122 (trimmed for quality and cloning vector)
GTTCATTTTCTTACTCAAACTCTTTTGGGAATCTTAGTTTCCTCTTATATTCATTTAAGGAAACATTTATAGACTCTTAGGGAACACGGAGTCCTCATAG
GACTTTTGAGAAATGAACGCAACTCCTTACTCTTTACTTAGCTTGAAACTTGAGTCTTAAATCAACTCTTTTGAAATACTCCTTGAATCTTAAAATAAAG
TTAGAAAGTTGTTAAAGACCCTTGAGAACTCTTAAGAACTTTACCTTAACTTGTTTCTTAACTTCTAGACTTGACTCTTAACTTCTTTGACTTTGATCTT
AACATTCCTTGAATTGGATTATGGATTCAAGGTGCATGACCTCATGTTTATGGATGATCTCATAATGTTTAGATGTGCCTTAGAGTTTTGGAATCAACTA
AGAAACATGGGTACATTACTTAGGAACTTTTACGAAAAGATGGAGAAAGAATGGGGTGAACTGGCGTCCTTGGCACGCTGAGAGATGTGGAGAACCAGGC
CCCAAACTTCAGAAGCCAAGTTGGGGCGTTCTGGCTAGCGCAGCTCCCCAATATGGACAGAGATTATCCTGTGGGGATATAAGAGGCGCAGTGACCCAAG
GCCCTACAAACAGGCTTTCTCGACTTTTATTATCCATTTTTAAACTCCAAAGCCTCTTAACGTCCAAGGTTACCGAACACATTTGACTCAAAAACAAACC
TGGAAACACGAATCAAATCAACTCTAGGCATGCAACAATTTTCTTCAAGAACTTCACTTTTTATCATTCAA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.964908
Expected error %
0.725659
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0235J18
Clone
Clone name
hba-235j18
LE_HBa0235J18
P235J18
Clone type
BAC
Contamination
none
Estimated length
59,246
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found