Clone Read LE_HBa0218K19_SP6_394970

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0218K19_SP6_394970
Primer
SP6
ID from Seq. Facility
LE_HBa_218_K19-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
826 trimmed for vector and quality, 870 raw
Sequence
>LE_HBa0218K19_SP6_394970 (raw untrimmed)
NNCCGTCTTCACCATTTAAGCAGCCACCTTGAATGGAGCTTTGGATCTCCAGATCTGTTTCCATGGCAAAAGACTTAGTAATCTGTCCGCTTTTGTTAAA
ATTTTGTAGCATGATCTTATTGTGAACAGACCCTTGTTGCTTGGGATCCATGTTATGTTGCCTTCTGTATTAGTTAGCTGCTGATGTATTTAAAAGACTG
AAAAATCAACAGCCCAGTTTTAACTGTCATAAGCTGGCACTCTCGTCTTGCTCTTGTCCAAGCTAGTTATGCAGTGGCATGTTGCTTACTTGGTTTGATG
TTTAAAAGGTTTGAACTGCCACTCTCTTATCCCGACCCCAGTAAATCTTCAGGTTAAGGTGGATGGAAATTTACTTGGGGCATAGTAGCTGAAAGGCTTT
AACCTTATAGCTAGTAGCCGTGAATATCCTCCTGTTCAATTGTACTTGGACCTTAAACATTTTAGTAGATTTATTCAGCATATTTGTCAGATTTACCTCT
TGACAGAATAGGGAGCACTGCAATCAGAATAACACTTTGAATTAAAAGGAATCAATTTTTTAGTTGAATGTGGCTTGGGTTACGTACTTCTGTTGGATGG
TAGCATAAAACGGGTGAAGAGAAGTAGAGATAAAGTGTAGCAAGAAGAGTACCCTTCTGAATCTTATGTGGATTCCTTGTAATGTTTATGAACAGTAATG
CTGAATCATAGAATATGTTTTATCAGTGTCTTGGTTAGCGGTAGCTATGAGATTGCGAAGAGTGAGGGAAAGGGTTAAGATTGATATTGATATTGTCTCC
TGGAGTGTATCCCAAATCTGCTCTCTCTTGCCTTTCTGTATCTGGGGTTTGTATTGAACTCATGAAATTT
>LE_HBa0218K19_SP6_394970 (trimmed for quality and cloning vector)
TTTAAGCAGCCACCTTGAATGGAGCTTTGGATCTCCAGATCTGTTTCCATGGCAAAAGACTTAGTAATCTGTCCGCTTTTGTTAAAATTTTGTAGCATGA
TCTTATTGTGAACAGACCCTTGTTGCTTGGGATCCATGTTATGTTGCCTTCTGTATTAGTTAGCTGCTGATGTATTTAAAAGACTGAAAAATCAACAGCC
CAGTTTTAACTGTCATAAGCTGGCACTCTCGTCTTGCTCTTGTCCAAGCTAGTTATGCAGTGGCATGTTGCTTACTTGGTTTGATGTTTAAAAGGTTTGA
ACTGCCACTCTCTTATCCCGACCCCAGTAAATCTTCAGGTTAAGGTGGATGGAAATTTACTTGGGGCATAGTAGCTGAAAGGCTTTAACCTTATAGCTAG
TAGCCGTGAATATCCTCCTGTTCAATTGTACTTGGACCTTAAACATTTTAGTAGATTTATTCAGCATATTTGTCAGATTTACCTCTTGACAGAATAGGGA
GCACTGCAATCAGAATAACACTTTGAATTAAAAGGAATCAATTTTTTAGTTGAATGTGGCTTGGGTTACGTACTTCTGTTGGATGGTAGCATAAAACGGG
TGAAGAGAAGTAGAGATAAAGTGTAGCAAGAAGAGTACCCTTCTGAATCTTATGTGGATTCCTTGTAATGTTTATGAACAGTAATGCTGAATCATAGAAT
ATGTTTTATCAGTGTCTTGGTTAGCGGTAGCTATGAGATTGCGAAGAGTGAGGGAAAGGGTTAAGATTGATATTGATATTGTCTCCTGGAGTGTATCCCA
AATCTGCTCTCTCTTGCCTTTCTGTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.964516
Expected error %
0.184095
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0218K19
Clone
Clone name
hba-218k19
LE_HBa0218K19
C06HBa0218K19
P218K19
Clone type
BAC
Contamination
none
Estimated length
99,100
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found