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Clone Read LE_HBa0236D02_SP6_395076

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0236D02_SP6_395076
Primer
SP6
ID from Seq. Facility
LE_HBa_236_D02-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
728 trimmed for vector and quality, 957 raw
Sequence
>LE_HBa0236D02_SP6_395076 (raw untrimmed)
NAAATTCTNNNNGGCTATGTNAGATAATGTTCACTATGAAATGCTGATTTGTCTTAGGTGTCCTAGCCCGATATATGCCTACTGTGCAAATATAATGCAC
TTGACGTGGCTGATACTTTTTTTTGCCTCTCAGGTTCTGCCTAGTTTGATGAAGTCACTGGCACAGTTGGTCGTTACATTACCACCAAGTGGCCAGGATA
TCATTCTCAATGAATTATATCAACATGTTGCAGAATCAGATGATGTTACACGGAAACCGACAATGGTTTCGTGGTTGCAGTCACTGTCTTATCTTAGTTA
TCAAAATACTAGCAAGAAAGCACCAAAAGTGGCAGCAAAAGAACTACATGATTCAATATCAGGAACTACAGACTCATTAAGCATGAATAAAATCAGTGCA
CGTCTGTAGAAGATTGAGGTATACAATTCTCACTTAATTGTTGGTAATATTACATAAGAATACATGTCCACTGTTAATCACTGGTCCCTTGAAATTTCAT
CACATCACACATGAATAAAACAAACAATCGTGGACAATGGTTATGCAGGATTCATGGATACCAGAAATGTGTAAGATGAGGTTAATGCTGAGATTGGTGC
TTCTTTAATCTGATGAGAAAATGTTCATTGTTTGGACTGCATTTGACTTGCAATTCTGTGCATAAAGGAATGTTAGGTTTTATTGCATTGTTGTTTATAA
ATAAACTTGTATTACAAAGGGAGCAATTGAGGAGAATTCTGAAAGACTTCTCTTCTATTTATCAAGAACTGATGTGACAAGTCACAAGTACTTGCAATTA
ATAATGTCACACAAGAGTGAGGACCATGAATTGGCTTTCTGGTGTTATATCCCACATATTTCCGTGTCTTTGATTTTCTGAATCCAATTTGAAAGTTTTC
TTCCCGAAATTATTAGGATCGGTTGCTAAGAAACCCAGGGCAAAATTTCAACTTCCG
>LE_HBa0236D02_SP6_395076 (trimmed for quality and cloning vector)
ATGAAATGCTGATTTGTCTTAGGTGTCCTAGCCCGATATATGCCTACTGTGCAAATATAATGCACTTGACGTGGCTGATACTTTTTTTTGCCTCTCAGGT
TCTGCCTAGTTTGATGAAGTCACTGGCACAGTTGGTCGTTACATTACCACCAAGTGGCCAGGATATCATTCTCAATGAATTATATCAACATGTTGCAGAA
TCAGATGATGTTACACGGAAACCGACAATGGTTTCGTGGTTGCAGTCACTGTCTTATCTTAGTTATCAAAATACTAGCAAGAAAGCACCAAAAGTGGCAG
CAAAAGAACTACATGATTCAATATCAGGAACTACAGACTCATTAAGCATGAATAAAATCAGTGCACGTCTGTAGAAGATTGAGGTATACAATTCTCACTT
AATTGTTGGTAATATTACATAAGAATACATGTCCACTGTTAATCACTGGTCCCTTGAAATTTCATCACATCACACATGAATAAAACAAACAATCGTGGAC
AATGGTTATGCAGGATTCATGGATACCAGAAATGTGTAAGATGAGGTTAATGCTGAGATTGGTGCTTCTTTAATCTGATGAGAAAATGTTCATTGTTTGG
ACTGCATTTGACTTGCAATTCTGTGCATAAAGGAATGTTAGGTTTTATTGCATTGTTGTTTATAAATAAACTTGTATTACAAAGGGAGCAATTGAGGAGA
ATTCTGAAAGACTTCTCTTCTATTTATC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.957945
Expected error %
0.28881
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0236D02
Clone
Clone name
hba-236d2
LE_HBa0236D02
P236D02
Clone type
BAC
Contamination
none
Estimated length
132,838
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found