Clone Read LE_HBa0236E02_SP6_395180

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0236E02_SP6_395180
Primer
SP6
ID from Seq. Facility
LE_HBa_236_E02-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
673 trimmed for vector and quality, 978 raw
Sequence
>LE_HBa0236E02_SP6_395180 (raw untrimmed)
TCGGTTTNAGCGCTGTGAAGGAGCTCATGGAAACTCTTAATTATTCTTCCTTCTTTTCTAGCGCTAATTTTCACTCTCTGTTTCATTCATAATACAAAAA
AATTATTGGAATCTGTTGTGTTTTCCAGAAGAGAGACAATCTTCCGGAATCCGATTTTGATATCGGACTCCGCCATGGAAGATGACTAGAATATTTGCAA
AGCCGGCGTCTCACCTCCGTCATTTACAGCAATCTTTGAAGAACAAATCATTTTCGAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGA
TATCGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTCTTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATAGAGCT
TGTATGTCCACTGATGACGAAGCCGCCCGTGAAATTACCATCTATCGTTCTCTCACCGACATCTTTTACTTCCTTCACATTGCCATGAAGTTCCGCACAG
CTTTTGTTGCTCCTAGCTCTAGGGTTTTCGGCCGGGGTGAGCTTGTTATGGATCCCCGTGAAATTGCTATACGATATCTCAAAACTGATTTCATCGTTGA
TTTTACAGCTGCTCTTCCCCTGCCTCAAGTCAGTACATATCCATTTAGTTTAATACTCTACTTTTATTATTGTTATTTTTAATTAATAGTGCCATTGCAG
ATTGTTATTCGCTATGTAATCCCAGCAGCCCAAAGAAATGGTTCGGGTCATTCCAAAAGTACACTTGCACTTATCGTTCTCATACAATATGTGCCAAGGT
TATTCCGTATTTTCCCCATTAAATCCGCCAGATTACCCAAAACTACAGGTTTTTATTGCTTAAAACACCCCTGGGGCAGGGAACCACCTTAAAAACCCCC
CTTCCGGTTCCGGTTAGCCAAGTTCATGTAACCCCCTCCATTTCCCCTTTCCCCTTTTTATTTTCGGAAAAAATTTTA
>LE_HBa0236E02_SP6_395180 (trimmed for quality and cloning vector)
ATTCTTCCTTCTTTTCTAGCGCTAATTTTCACTCTCTGTTTCATTCATAATACAAAAAAATTATTGGAATCTGTTGTGTTTTCCAGAAGAGAGACAATCT
TCCGGAATCCGATTTTGATATCGGACTCCGCCATGGAAGATGACTAGAATATTTGCAAAGCCGGCGTCTCACCTCCGTCATTTACAGCAATCTTTGAAGA
ACAAATCATTTTCGAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGATATCGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCT
CATCTCTCTTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATAGAGCTTGTATGTCCACTGATGACGAAGCCGCCCGTGAAATTACCATC
TATCGTTCTCTCACCGACATCTTTTACTTCCTTCACATTGCCATGAAGTTCCGCACAGCTTTTGTTGCTCCTAGCTCTAGGGTTTTCGGCCGGGGTGAGC
TTGTTATGGATCCCCGTGAAATTGCTATACGATATCTCAAAACTGATTTCATCGTTGATTTTACAGCTGCTCTTCCCCTGCCTCAAGTCAGTACATATCC
ATTTAGTTTAATACTCTACTTTTATTATTGTTATTTTTAATTAATAGTGCCATTGCAGATTGTTATTCGCTAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.96541
Expected error %
0.118934
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0236E02
Clone
Clone name
hba-236e2
LE_HBa0236E02
C02HBa0236E02
P236E02
Clone type
BAC
Contamination
none
Estimated length
75,327
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found