Clone Read LE_HBa0219C20_T7_395701

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0219C20_T7_395701
Primer
T7
ID from Seq. Facility
LE_HBa_219_C20-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
723 trimmed for vector and quality, 987 raw
Sequence
>LE_HBa0219C20_T7_395701 (raw untrimmed)
TTTAGGNNGGCTCTGACGGGGATCTCTGAGTCACCTGCAGGCATGCAAGCTTAAGTCTGCCTTAACTAAATTGGGCTTTGAAAATTGAAATACTTGTCAC
AAAATAGTGAAAGAAAGGTCATTAAAAAATCTCCCGGGAAATCATCTAAGTTAGATAATAAGTTGAGTAATCACAGTAAACAATGAGTTCCTCTGGGACT
GCCGCTACCTGTTTCAGCTGCTGCTGGTTTTTGAGTTTTAACCCAATAGTATTTGCTTCCCTTTAGCGACTTGGTGGAGGTTGACTCGAAGAGAGGAATA
TGCAAGAGTCCAATGGACTCAAATGGAAGAGTGCATGCAAAGAAAACAAAGAAAAAGAATTAATAACTAATAAAGAAGGGGCTGATACTAATTTAACATG
TAAACAAACTCAATCAACATTTGATGATGCAAATTAAGTCTGCCAGCGTAAAGAGGAAAAAAAGGAAACAAGGAGTACAACTTCCAATCCTAACACATAA
TAGAAGTCAACATAATCGCAATTTTAGTCAGCAAATAAGTGTGGAAGGCATAGTTAAAAGCATTCTTGCACCAACTTTAACCAACAAGAGCTATATCATG
TAGGGGTCTGTTGGTTGGAAGCTTCTAGGCGTCCTCGAGTCGTGCTAAGCACGCGGAGTGTACGAATTGAAGGAAAAAAGAGGAAATTGAGGCGGCAAAA
TGAGGATTTAGGGCTGGGTCCATCTGGTTGAGCATTGTTGGCGTTGTGCTTGTTGTGAGCGAGAAGAAAGAGTGAGGGGTCTGGGTTGAATTGGAGTTGG
GGCGGGTGTTTCATAATGGGCCAAATGTATGGTCTTAAAGGAAAAAAGAAAGGAACAGGTTGTTTGGTTTCCATATTTTATCAAATTAAACCGAATTTGG
ATAAACGGGAAAGGAGATAAATCCTAAATTTTACCTAATTTTTAAGCTTCTTAACTTTCCAAAGAAAAAAAAATATTTTTTTATAAA
>LE_HBa0219C20_T7_395701 (trimmed for quality and cloning vector)
CTGCAGGCATGCAAGCTTAAGTCTGCCTTAACTAAATTGGGCTTTGAAAATTGAAATACTTGTCACAAAATAGTGAAAGAAAGGTCATTAAAAAATCTCC
CGGGAAATCATCTAAGTTAGATAATAAGTTGAGTAATCACAGTAAACAATGAGTTCCTCTGGGACTGCCGCTACCTGTTTCAGCTGCTGCTGGTTTTTGA
GTTTTAACCCAATAGTATTTGCTTCCCTTTAGCGACTTGGTGGAGGTTGACTCGAAGAGAGGAATATGCAAGAGTCCAATGGACTCAAATGGAAGAGTGC
ATGCAAAGAAAACAAAGAAAAAGAATTAATAACTAATAAAGAAGGGGCTGATACTAATTTAACATGTAAACAAACTCAATCAACATTTGATGATGCAAAT
TAAGTCTGCCAGCGTAAAGAGGAAAAAAAGGAAACAAGGAGTACAACTTCCAATCCTAACACATAATAGAAGTCAACATAATCGCAATTTTAGTCAGCAA
ATAAGTGTGGAAGGCATAGTTAAAAGCATTCTTGCACCAACTTTAACCAACAAGAGCTATATCATGTAGGGGTCTGTTGGTTGGAAGCTTCTAGGCGTCC
TCGAGTCGTGCTAAGCACGCGGAGTGTACGAATTGAAGGAAAAAAGAGGAAATTGAGGCGGCAAAATGAGGATTTAGGGCTGGGTCCATCTGGTTGAGCA
TTGTTGGCGTTGTGCTTGTTGTG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.964216
Expected error %
0.25822
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0219C20
Clone
Clone name
hba-219c20
LE_HBa0219C20
C08HBa0219C20
P219C20
Clone type
BAC
Contamination
none
Estimated length
79,088
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found