Clone Read LE_HBa0221N06_T7_398119

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0221N06_T7_398119
Primer
T7
ID from Seq. Facility
LE_HBa_221_N06-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
5 trimmed for vector and quality, 1162 raw
Sequence
>LE_HBa0221N06_T7_398119 (raw untrimmed)
ACGGACGGGGTATCTCTAGAGTCGACCTGGCAGGCATGGCAAGCTTGGAAGCGGATTCAGAACGTTCACACCTCGTTGGAATGTCTCGCTATCGAGGGTG
AACAGCAACGAAACTCCGCGCGCACCTTCCAATGCATACATATGTGCTTGCCTGTCTGCAAGTATTTAAGCGTTGAACAGTTCCAGACTTCTCTCACGCA
ACGCTCAAGGATCGATAGCGTACACTGACATCTTTCAACTCATGCTGATTTCTAGTTATATCCCGATATGTTACTCTTCCTCTGAGTTGCTCTATATAGT
AACAAGGACTATCCAGTGTCCTTGCGTACTTAGCGCACCAAGCTGGGCATCAACCACATGAGGCGACGCAGCATCAGACTTCTGACCATGTAAATGTAAA
GTACGCATCAAAACTGAAGTATAATCGACGTTACAATATACAATATTAGAGAATCAACAATAGATCGGACAAACGCGAAGCTTCATCATGAATACGTAAC
AGCAACTGCCATCTCACACTAATGTCATTTATAGACATGTCACAAGTGTGATACGTTCAAGTATAGTCTTTCAAATATTCGTGAGCGCTCTCCTCTCGAC
TACATTGAGACAACTATCGTGGTGTAATACATATCTACCATAAAGCAACAACAAACCATCTCCATATGCCAATGGCAAGAAACGGACACCTAGAGACTGC
AACATCTTTCTTCTTAGATGTAAATTCAGCCATAGACTACGTTCTGTATGTACACGATATGTATTATATCGTAACCTACGGTACTTCGCCTAACGTAAAT
CTTATTCAGTGAGATACCGAAGCAATTTGCTATTCTGTTATATCATGATAATAGCAGGAAATACTTGGGCACAAATTCTTGTGAATCTAGTCTTCTACAA
TGGGTCAAAATACCTGTCAAAACATTACTAGGATTCCCCCACCTTCATGTTCCAAATCAGACTCTATTGGTTAGGAAACTACCGACTTTTTCGACCGCCG
GATTCAAGCCCAGATTTAGGGAAAATATTGCCCCACCAACCGTGGTGTCTATTTACGCAATTTACCTTTCAAAAAACGGGAACTTAAAAATTTGCCGGGG
CATTGGAATTTACTCGTACCCTCCCAATCGAAGGGCTAATTTTTTAAAACCATTTATTAGGG
>LE_HBa0221N06_T7_398119 (trimmed for quality and cloning vector)
AAGCT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for contaminants
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.29048
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0221N06
Clone
Clone name
hba-221n6
LE_HBa0221N06
P221N06
Clone type
BAC
Contamination
none
Estimated length
23,376
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found