Clone Read LE_HBa0222D12_SP6_398706

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0222D12_SP6_398706
Primer
SP6
ID from Seq. Facility
LE_HBa_222_D12-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
709 trimmed for vector and quality, 964 raw
Sequence
>LE_HBa0222D12_SP6_398706 (raw untrimmed)
CGGTTGATATCTTCTTTGCTGATTTCATAACTTCATTAGTAGCTTCATTTGTTTGTGAAGGCATCTTTCTCTCATTTTCAATAGGAACAATATTAGAGGA
TAAACCAGTTGGATTTTATTTGTCTTGAGACTCAATCAGTTTACTGTAAGAAAATCAACAAAAGAAGATATTAAGAAGAGGTAAACAAATTATTATTATT
AGTACTATAAGAAAATTAGTGAAGAGGAATAAAACACACGTAATCGATTCGGATCAAAATATGTGTAATAGATTTACATATATTTTATAGAATCAAAATC
GAGTAACAACATATTCTACAAGACACGAATAAAAATGACCAATTCTAGATAAACTCATACAAGAATTAGCCATTAAAAGTCATACAAATTCGTGGATTGA
AACAATTTCAACACTCACTACTTCAAAAATTCAAATAATCAATCAATTTGGATTATACACTTGCAGTCAAGCTCAAATACTCAAGTTAATGGACCAAAAA
TAGTAAAACTCAACAAATAAAAACAGTATCTCGCCAGCAAGCTCAAATACTTAATTAAATCAACTACATTATACTATGTGAAACTAGAGTTTAATAGAAT
AGAAAATAGACTGTTTGAGAAAACTTACTTAGCGGACGTTGAAGCTGCTTTATGGATAGCGACTCTTTCAGCAGAGCAATAAATCAAATTTCTGGAGCAA
AATAACCTGTAATATGGAGAGTAGTACTTTCGAAGAAATCACAGAGGAAAAGGTAATAGTTTACCTCCTCTTTTCATGGGATATAGCCAGAGAGAGCCCG
AGAGCAGAGCTTTTTCCTTTGCTAACTCCATTGCGTTTCGTCTATCGCTGTAAGCCCATTTTTAAATGGACACCTTCCAAAAATAGCTATTATAGAATAA
GTAATTATTTTTTCTAACCTACAGTTTTAATAAAGGAAAAATACCCCGGATAAGCCAACTTATA
>LE_HBa0222D12_SP6_398706 (trimmed for quality and cloning vector)
TGATTTCATAACTTCATTAGTAGCTTCATTTGTTTGTGAAGGCATCTTTCTCTCATTTTCAATAGGAACAATATTAGAGGATAAACCAGTTGGATTTTAT
TTGTCTTGAGACTCAATCAGTTTACTGTAAGAAAATCAACAAAAGAAGATATTAAGAAGAGGTAAACAAATTATTATTATTAGTACTATAAGAAAATTAG
TGAAGAGGAATAAAACACACGTAATCGATTCGGATCAAAATATGTGTAATAGATTTACATATATTTTATAGAATCAAAATCGAGTAACAACATATTCTAC
AAGACACGAATAAAAATGACCAATTCTAGATAAACTCATACAAGAATTAGCCATTAAAAGTCATACAAATTCGTGGATTGAAACAATTTCAACACTCACT
ACTTCAAAAATTCAAATAATCAATCAATTTGGATTATACACTTGCAGTCAAGCTCAAATACTCAAGTTAATGGACCAAAAATAGTAAAACTCAACAAATA
AAAACAGTATCTCGCCAGCAAGCTCAAATACTTAATTAAATCAACTACATTATACTATGTGAAACTAGAGTTTAATAGAATAGAAAATAGACTGTTTGAG
AAAACTTACTTAGCGGACGTTGAAGCTGCTTTATGGATAGCGACTCTTTCAGCAGAGCAATAAATCAAATTTCTGGAGCAAAATAACCTGTAATATGGAG
AGTAGTACT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.920455
Expected error %
0.214091
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0222D12
Clone
Clone name
hba-222d12
LE_HBa0222D12
P222D12
Clone type
BAC
Contamination
none
Estimated length
99,826
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found