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Clone Read LE_HBa0222H10_SP6_399074

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0222H10_SP6_399074
Primer
SP6
ID from Seq. Facility
LE_HBa_222_H10-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
89 trimmed for vector and quality, 931 raw
Sequence
>LE_HBa0222H10_SP6_399074 (raw untrimmed)
CACTCGCGGACACAATTATTACCAGGGACCCCGGATCTGTAATTCCCGACTATGGCGGATAATCGTTCACCAACTACTTGCCTAGACCACACCACCATGG
TCAAATTTTTTTGCAAATTAAAGACATTGTTTGGCTTTTTAAAAGTTTTTTCTGTGTGTGTGTCTGTGGCGTGCGGGGGGGACAGGGAANTATAAATTCA
AACATACCCAAAACCCACCCCCCCAACCCCAATCCTCCACCACCACACAAGAGTTAACCGCACTCCCGCCCCACCCCCCCTGCCACCCACACAACCCCTC
CCCCCCCACCCACCCCCCACCGCCAAACCCTCCCACCCCTCCACACAACACACCCCCCCTCACCACCAACACCACGCCACCACCCCCCCCCCACCCCACC
TCACGCCCCCACGCCCCCCCCACAACACCCCCACACCAAACCCCCGCACCCCCAGCTCCCACGCCCCCCACACCTCACCCCCACCCCCACCCCCCCCCCC
CCACCCCCCCCCCTCCCCCACCCCCCCCCCCCACCCCCACCCTCCCCCCACCCCCCCCGTATCCCCGTCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCC
CCCCCACCCCCCCCCCCCACCCCCCCCCCCCACCCCACCCCCTCCCCCTCCACCCCCCCCACCCCCCCCCCCCCCCCGCCCCCCCCCCATCCCCACCCCC
CCCCCCCCCCCCCCCTCCCCCCCCCCCCTCCCCCTCCCCCACCCTCCCCCCCTCCCCCCCCCCCCCCCCCACCCCCCCACCCCCCCCTCCCCCCTCACCC
CCCCCCCCCCCCCCCCCCACCCACACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCACCCCCCCCCCCCCCACCCC
CCCACACCCCCCCCCCCCCCCCCCCCCATTC
>LE_HBa0222H10_SP6_399074 (trimmed for quality and cloning vector)
ACTACTTGCCTAGACCACACCACCATGGTCAAATTTTTTTGCAAATTAAAGACATTGTTTGGCTTTTTAAAAGTTTTTTCTGTGTGTGT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.894584
Expected error %
1.10639
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0222H10
Clone
Clone name
hba-222h10
LE_HBa0222H10
C10HBa0222H10
P222H10
Clone type
BAC
Contamination
none
Estimated length
127,465
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found