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Clone Read LE_HBa0238O12_T7_399412

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0238O12_T7_399412
Primer
T7
ID from Seq. Facility
LE_HBa_238_O12-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
17 trimmed for vector and quality, 907 raw
Sequence
>LE_HBa0238O12_T7_399412 (raw untrimmed)
NNTTACCGACGAGCACGACGGACGCCACGGGAGGGAACCAGCAGCAAACCCCCATCAAGCCGACCCATAGAGGGGCACANGAAAGGGGAAGGGCACGACG
AACAACCGCAGGAGCGACGGACACCGACACCGAGCCCGAGAAAAAAAAAGAGGCACAAAACAAACAAAAAGCCACAACAGAAGCACCAAAAGCCACCCGA
CGGACGGAAAAAGCGCGAAAAAAGCGGGACGCGCCAGCAACAAGCGACACCAAGAGACGGGAACGCGAGATATCAACGGAGGCAAAGAGACAGCCCACCC
AAAGAACGAACACTGGCAACACGACAAAGGAAGCCGCGATGA
GCACACAACCCACAAGAACAGCGGAAAGAACGCAAGCCGCGCCCGAGCAGGATCGCCT
GCGCAACGGAAGACCAAAACAGGATCGAAAGAGTAAGCCAGAAGAACCGCGCAACAAAGGAAGGTAGCGCACCCAACCAACAGAGAACCCAGAGGACGAC
AGAGGCACAGAAAGACGACAACAAACAGGCCGCGCGGAGACAAGCACAGCGGAAAAGCCCCGGGAGCCAACACAGACCAGGAAGCAAAGGCCCCAAAGAC
ACAAGGAACCACAACGACACAAAAGCGCAAAGCGGGGAAGAAAGAGCACCCCCCCCACAAAAAAGGCACGAAAAAAAAAGCCAAACAGGCGAAAGAAAAA
AACCGCGAGCAGAGGAAACACCAAAAACAAACCACCAGGCAGGAACCAAAAAGCCACACAAAAGGCCAGCACACAACAACAAAGACGGGACCCCCAGGGA
ACAAGCCAACGAGAACGAAGCAGCAAACAAAAGGCACAAACAAAGAGAGAACCAGAACAGAAAAAGGCGGCAAACAGGCAAAAACGGGACAGGAAGAAAA
AACACCC
>LE_HBa0238O12_T7_399412 (trimmed for quality and cloning vector)
GCACACAACCCACAAGA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for contaminants
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.204184
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0238O12
Clone
Clone name
hba-238o12
LE_HBa0238O12
C08HBa0238O12
P238O12
Clone type
BAC
Contamination
none
Estimated length
115,841
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found