Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0223P20_T7_401457

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0223P20_T7_401457
Primer
T7
ID from Seq. Facility
LE_HBa_223_P20-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
724 trimmed for vector and quality, 949 raw
Sequence
>LE_HBa0223P20_T7_401457 (raw untrimmed)
CGTCGGGGATCTCTGAGTCGACTGCAGGCATGCAAGCTTGTCATCTTCCGGTTGAGTTAGCTTATAAAGCCATGTGGGCTATGAAGAAGTTGAAATTGGA
TTGGAGCGAAGCTGCAGAGCAACGGTTAAATGGGTTGAATGAACTTGATGAATTTCGCTTAAAAGCCTATGAAAGCTCAGCCCTATATAAAGAAAAGATG
AAGAAGTATCATGACAACAAAATTGAAAAACGAGAGTTTATGGTCGGGGATTTAGTGCTTCTATTCAATTCCAGATTGCGCTTGTTTCCAGGCAAACTCA
AGTCCAAATGGACTGGTCCTTACACGGTTACCCAACTATTCCCTCATGGAGCAGTTGAGTTGGAAACCAAGGAGGGTGTGCGGTTCAAGGTGAATGGACA
GCGCATAAAAATCTATCTAGGGCATGCTGAATTGGCGAATGAAGTGATCGAGGCATACCATCTTGATGAAGTCTGAGTAATCAAGTGGGCCCAGTCGTGC
CGCGACGTTAAATCTGGCGCTTGTTGGGAGGCAACCCAATACTTGTCGTCTTTTTAATAATGGTAGCATTTTTCTATAAATGGGTTTTAAATTTGCAGGC
ACATCACCAGGAAATTCTCCAGAAAACTACTCCGCAGTAGCCACTGACGGATACAACGACGGACTGTCGCGTGTGAAACGGACCGTCGTATGCACCGTCA
CACCAGGTACGTATTTCTGTCATTATTTTGAACTAGGGCACACACGACGGACACCACTACGGGGCATCGCATGTGCGACGAAACGTCGTCGGGGTACCGT
CGCGCGATTAATGAAATAACCCCGACCCGACCCGGCTGGATCCCTTTTCAAAATTTAACCGGTTATACTCCCATCCCTCCATATTCCACCCATTACTTCC
CTCCCTCTCATCTCCCTCTCTTTTCACTTCCAACTTCCCCCACTTCAAA
>LE_HBa0223P20_T7_401457 (trimmed for quality and cloning vector)
CTGCAGGCATGCAAGCTTGTCATCTTCCGGTTGAGTTAGCTTATAAAGCCATGTGGGCTATGAAGAAGTTGAAATTGGATTGGAGCGAAGCTGCAGAGCA
ACGGTTAAATGGGTTGAATGAACTTGATGAATTTCGCTTAAAAGCCTATGAAAGCTCAGCCCTATATAAAGAAAAGATGAAGAAGTATCATGACAACAAA
ATTGAAAAACGAGAGTTTATGGTCGGGGATTTAGTGCTTCTATTCAATTCCAGATTGCGCTTGTTTCCAGGCAAACTCAAGTCCAAATGGACTGGTCCTT
ACACGGTTACCCAACTATTCCCTCATGGAGCAGTTGAGTTGGAAACCAAGGAGGGTGTGCGGTTCAAGGTGAATGGACAGCGCATAAAAATCTATCTAGG
GCATGCTGAATTGGCGAATGAAGTGATCGAGGCATACCATCTTGATGAAGTCTGAGTAATCAAGTGGGCCCAGTCGTGCCGCGACGTTAAATCTGGCGCT
TGTTGGGAGGCAACCCAATACTTGTCGTCTTTTTAATAATGGTAGCATTTTTCTATAAATGGGTTTTAAATTTGCAGGCACATCACCAGGAAATTCTCCA
GAAAACTACTCCGCAGTAGCCACTGACGGATACAACGACGGACTGTCGCGTGTGAAACGGACCGTCGTATGCACCGTCACACCAGGTACGTATTTCTGTC
ATTATTTTGAACTAGGGCACACAC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.988598
Expected error %
0.389219
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0223P20
Clone
Clone name
hba-223p20
LE_HBa0223P20
P223P20
Clone type
BAC
Contamination
none
Estimated length
115,124
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found