Clone Read LE_HBa0117N09_SP6_40192

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0117N09_SP6_40192
Primer
SP6
ID from Seq. Facility
LE_HBa_117_N09-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
452 trimmed for vector and quality, 936 raw
Genbank Accession
DU060453
Sequence
>LE_HBa0117N09_SP6_40192 (raw untrimmed)
GCCGGGTTTTATCATCGTTCTTTCCACCCATTAACATTACATAATCACATCATGCAAGCACACAATTAAGCATATAGAATACTTTACAATACTACCCAAT
ACATATCATTCGCTATTAAGAGTTTACTATGAAATAGCATAAACCATAACCTACCTCCACCGAAGAATCGTGATCAAGCAATCTACTTCTCCAATGCTTT
GCTTTCCTCTTCGTTTCTCCCTCTCGTTCGTTCTCCCCTCTTCTCTCTGTTCTTTCTATTTTTCCTTCTTCAAATTCTTTTCCTTTACCCTAATTACCAT
ATAATTAAGTATAAAATATGGTAAAAGTAACCCACTATTTATTCCAAGGTTGTCTCCTTTAACCCCCAAATAATTGAATTATTAACATTAACCAACTAAC
TTTATAATTATAAGTAGGAATAGTCCAAAACGCCCCTTAAACTTTTAACAAAAATCCGACCCATTCAGGGTTACGCAGCCTGTGACGGGCCGTCGTGCCT
GCGACGGTCCATCCTGCTGAGGCGGTCATAAATTTAATAAATTAAATTTAATTAAAGGGTGTGTGAGGGTTGGCTGAGCCATGGCTTGTTTCCTTGTGTT
TTGTTATCCTGACGTCCCAGGTATCTTCTGAGTGGCCATAGTGTAGAGGTGATGTGGTTTTGTTGGGGGACGCGTTTGTGACTCGGGTGGGCGGGCGAGT
TGGCGGGGAGGTGTTTTCGCTGTCTACTAATGTTGTGGGGTGGTTCTGTCTTTCTTTTTGTCTTTTTTTTGTGAGTCGTTAGTTGTTCATTTTGTTATGT
ATTTTTGGTAGCTGATCTGATGGTGATGGGGTTAGTTTGATGAGTTGATATCGTGAGTTGTTGGGTATGCTTTTATCAAAATATTCATTTCGACCATGCA
CACGATATCCTCCATCGTCATCCTATACTTCGTCTA
>LE_HBa0117N09_SP6_40192 (trimmed for quality and cloning vector)
ATTACATAATCACATCATGCAAGCACACAATTAAGCATATAGAATACTTTACAATACTACCCAATACATATCATTCGCTATTAAGAGTTTACTATGAAAT
AGCATAAACCATAACCTACCTCCACCGAAGAATCGTGATCAAGCAATCTACTTCTCCAATGCTTTGCTTTCCTCTTCGTTTCTCCCTCTCGTTCGTTCTC
CCCTCTTCTCTCTGTTCTTTCTATTTTTCCTTCTTCAAATTCTTTTCCTTTACCCTAATTACCATATAATTAAGTATAAAATATGGTAAAAGTAACCCAC
TATTTATTCCAAGGTTGTCTCCTTTAACCCCCAAATAATTGAATTATTAACATTAACCAACTAACTTTATAATTATAAGTAGGAATAGTCCAAAACGCCC
CTTAAACTTTTAACAAAAATCCGACCCATTCAGGGTTACGCAGCCTGTGACG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.92333
Expected error %
0.147584
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0117N09
Clone
Clone name
hba-117n9
LE_HBa0117N09
C08HBa0117N09
P117N09
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found