Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0225F05_SP6_401973

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0225F05_SP6_401973
Primer
SP6
ID from Seq. Facility
LE_HBa_225_F05-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
656 trimmed for vector and quality, 901 raw
Sequence
>LE_HBa0225F05_SP6_401973 (raw untrimmed)
GTAGAATAACTTATTGTATGGAATTCTTACAAAGTTTTGACTTAACGAATCAAAACATGAGGTGCGAACATTTATGAGAAATATGCTCTTTTTGATTAAA
ACTTAATAATATAAACATAAGGATCACATTTAAACACCAAACAACATAATTAGAAGACACTACAAATTATAACCAAATTATCTGAAAGTTACTGTAACAT
CATAGTGGCGTAACAGAGACTTCACTATAACTTCACCAATAATCCACACTTCACAATATATTATCAAATACACTTACATAGAATGAGATCATCCTACCAA
GGATGATTACAAGGCTTACTTAAGTGATTTATCAAGCGACCACCCATACGATTCCTTCATACACACCTAAGATATTCCTTAGAGTACCTAGGATAAGATT
ATTCTCTTTAGACAACATAACATATATATAATATGACATTCTCAAACCAAAGGTTATAAATATACTTACTTAAGTAAATCAAGAAGAGAACTCTCATACA
CCCTCTCCAAGATTACCTAAATAATCCTTAAGACTACCTATGTTTAGATAATGTCTATTTATTCAATTTACTTCCCAATCTTGTGTCATTTTAGGAGTTC
CCTAGGTACGAGATGAAGTGACCATTCCTATGCCCCCTTCACACTTTAACTATGCAGCCCTTAACCTATTTTAGGTAAGTACATTTTCATTTAACATACT
TCCTAATTTACGTCATTATCTTCATTAGTTCACTTAAAAGACAGTCACCATATAAGTACATTCAAGTACTTGTCTTGGATAAGACCTANAGATTCACTCA
CTAACATCTTTTAAGCCCGATCCTGCAAAGTCTAGATAGCATCCCCTACCCACCACTTAAACTTCGAAAATTTTCTGTAAACTTATAAGCATTCCATATG
A
>LE_HBa0225F05_SP6_401973 (trimmed for quality and cloning vector)
ACATGAGGTGCGAACATTTATGAGAAATATGCTCTTTTTGATTAAAACTTAATAATATAAACATAAGGATCACATTTAAACACCAAACAACATAATTAGA
AGACACTACAAATTATAACCAAATTATCTGAAAGTTACTGTAACATCATAGTGGCGTAACAGAGACTTCACTATAACTTCACCAATAATCCACACTTCAC
AATATATTATCAAATACACTTACATAGAATGAGATCATCCTACCAAGGATGATTACAAGGCTTACTTAAGTGATTTATCAAGCGACCACCCATACGATTC
CTTCATACACACCTAAGATATTCCTTAGAGTACCTAGGATAAGATTATTCTCTTTAGACAACATAACATATATATAATATGACATTCTCAAACCAAAGGT
TATAAATATACTTACTTAAGTAAATCAAGAAGAGAACTCTCATACACCCTCTCCAAGATTACCTAAATAATCCTTAAGACTACCTATGTTTAGATAATGT
CTATTTATTCAATTTACTTCCCAATCTTGTGTCATTTTAGGAGTTCCCTAGGTACGAGATGAAGTGACCATTCCTATGCCCCCTTCACACTTTAACTATG
CAGCCCTTAACCTATTTTAGGTAAGTACATTTTCATTTAACATACTTCCTAATTTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.927807
Expected error %
0.514397
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0225F05
Clone
Clone name
hba-225f5
LE_HBa0225F05
C12HBa0225F05
P225F05
Clone type
BAC
Contamination
none
Estimated length
96,914
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found