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Clone Read LE_HBa0117O08_SP6_40238

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0117O08_SP6_40238
Primer
SP6
ID from Seq. Facility
LE_HBa_117_O08-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
743 trimmed for vector and quality, 915 raw
Genbank Accession
Sequence
>LE_HBa0117O08_SP6_40238 (raw untrimmed)
GGGGGGGGGTTTTCAACCTAAGAACTCCTCCTTAGAATACCTTCAAGGCTTACTAGTGCGATGTTTAGGTAGAGTCACATTCCTCTACATAGACTAATCT
AAACCCTTTAGATTATGTTACTTAGAGTTCATTCCATTAATTCACTTTACCTTTGTGGAACATCTTACTTAAGTGATATTAAACACATGAGCTAATGTAG
AATCCAGTGTCATGGAACCCTACACTGAAGGAAGGCGGACTACTTGCCAAAGTGGTACGAAAAAATGAACATAGTATTTATTTGGATCCACTAGGAAGTA
TTCCTACGAAGGCAACATAGTTCTAGAACTAGGAGATACAGTTGGGACCCTCTTTAAGATACATCAATTATAATCTCCAATCTGAAGAGAATATTAGCGA
TCCTACCTTGCCTATGTGGAAAGAAACACTACTCACTCTAGTTCACTTGGTGATAAACTAGTGTCCCTTTTGAAATGTCTTTAATGTATTTATTAATCAT
CATAGCTTAATGAAGGTCATAGGCTATATCCTTGTATAATCATCATCATAATTGTTCAATAAGAATTGCTTGAGTATAATCTTTTTATTACATACATGTG
AGGCTAGAACACGTAGTTATATCATATTAAGGCAGTTCAGTAAATCATCACCATCCTTATAATGTTTACATCTTAGCAACACCTCACAAACCATAGTCAA
GAAATTTGAATTTTAACATCATACTAACCCTATCAATCCTAATATGAGTCTCCCTCATAATTCATGATCAAGGTCTTACCATCAACACTTATTCCACCTT
ATTGAGTTATAGTATAATCATATTCAAAATAACCAATATGATAACAAGCCTAATTGAATCCACTAATCACAATCCCACACTACCTCCCCGCTTCAGACAT
GAGATGAATATCAAG
>LE_HBa0117O08_SP6_40238 (trimmed for quality and cloning vector)
TCCTCCTTAGAATACCTTCAAGGCTTACTAGTGCGATGTTTAGGTAGAGTCACATTCCTCTACATAGACTAATCTAAACCCTTTAGATTATGTTACTTAG
AGTTCATTCCATTAATTCACTTTACCTTTGTGGAACATCTTACTTAAGTGATATTAAACACATGAGCTAATGTAGAATCCAGTGTCATGGAACCCTACAC
TGAAGGAAGGCGGACTACTTGCCAAAGTGGTACGAAAAAATGAACATAGTATTTATTTGGATCCACTAGGAAGTATTCCTACGAAGGCAACATAGTTCTA
GAACTAGGAGATACAGTTGGGACCCTCTTTAAGATACATCAATTATAATCTCCAATCTGAAGAGAATATTAGCGATCCTACCTTGCCTATGTGGAAAGAA
ACACTACTCACTCTAGTTCACTTGGTGATAAACTAGTGTCCCTTTTGAAATGTCTTTAATGTATTTATTAATCATCATAGCTTAATGAAGGTCATAGGCT
ATATCCTTGTATAATCATCATCATAATTGTTCAATAAGAATTGCTTGAGTATAATCTTTTTATTACATACATGTGAGGCTAGAACACGTAGTTATATCAT
ATTAAGGCAGTTCAGTAAATCATCACCATCCTTATAATGTTTACATCTTAGCAACACCTCACAAACCATAGTCAAGAAATTTGAATTTTAACATCATACT
AACCCTATCAATCCTAATATGAGTCTCCCTCATAATTCATGAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.954231
Expected error %
0.169622
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0117O08
Clone
Clone name
hba-117o8
LE_HBa0117O08
P117O08
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found